Gene CPS_3480 details

Gene Information

• Locus tag: CPS_3480
• ID: 3519881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 3618815
• End bp: 3619417
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637285928
• Product: hypothetical protein
• Protein accession: YP_270154
• Protein GI: 71279423

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACTC TTTCTCTCGA TCAAAAATTA GCACAATATG ATGAGTTTTT TGCCATTGAA 
CATGAGTTCT CGGTAAATAT CCTGCCTATT GATAATACTG ACGACTGCAG TTATGACAAA 
TTTATTTCCA GTATGCCTAT GCCTTTCAAA CTCGCTACTG ATATGAGCAC AATAGATCAA 
TCAGCTTTAC GATCATTACA AGGCATAGGT AACAGTGCTT CTCAGCTTGT TAGCTTTCTT 
AATCAACAAT CAAAAAAAAT TGACTTACTT ATTGGCTATA TTCTGAGTCA GCAAGATGAG 
TTACAACATA GATACCAAGG GATAAAGTTT GGTGGCGGCG GTATTAAGTT TGTTACTCCA 
AAGGCGTTTA ATATAGGCCA ATTACTTGAG CTTAAAATAT TCCTGCTAGA AAGTCACTGT 
GCTATATATT GCTATGGTGA AGTCATCGAG GTTGAAGCAG CTAACGAACT ATTTATCCAC 
AAAGTTACTT TTCATTTTAT TCGTGAAGAA GACAGAGAAA CCTTAGTACG TGGCAGCTTA 
CATGAGCAAT CTAAACAATT ACAAAAGCTG GCAAAATTAC GTAATCAAGA AAGTGAACAG 
TAA 

 

Protein sequence

MSTLSLDQKL AQYDEFFAIE HEFSVNILPI DNTDDCSYDK FISSMPMPFK LATDMSTIDQ 
SALRSLQGIG NSASQLVSFL NQQSKKIDLL IGYILSQQDE LQHRYQGIKF GGGGIKFVTP 
KAFNIGQLLE LKIFLLESHC AIYCYGEVIE VEAANELFIH KVTFHFIREE DRETLVRGSL 
HEQSKQLQKL AKLRNQESEQ