| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3401 |
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| Symbol | |
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| ID | 3521057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3528626 |
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| End bp | 3529924 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637285849 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | YP_270076 |
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| Protein GI | 71280589 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.571925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAACTG TTACAACGCC TGCCACCTTT ACAGAACTTG GCCTTATTAC CCCCTTATTA
GCGCGATTAG CTGAGCTGGA ATATCATCAG CCAACGCCTA TTCAAGCGCG AGCTATCCCA
AGTGTATTCG CGGGACGTGA CTTAATTGCA GGGGCAAATA CCGGCTCAGG TAAAACAGCC
ACCTTTGCAC TGCCTATGTT GCAGAAATTA CGCGAAGACA TTTCATCGGG CAGCAAAAAC
AGTAAAGGTA ACTTTGTTAC TGGACTAGTT TTAGTACCTA CTCGTGAACT CGCCAAGCAA
GTTGCAGACA GTATTAAATC TTATGCAGTG CATTTTAATG GCGAAATTAA AACCCTTGCT
GTTTTTGGTG GCGTATCAGT CAATATTCAA ATGCTCGCAT TACGCGGTGG CGTCGATATT
TTGGTGGCAA CGCCGGGTCG ATTACTTGAT TTAATTTCAA GTAATGCCAT CAAGCTCGAT
AAGGTTAAAA CCTTAGTACT TGATGAAGCC GACCGCATGT TAAGCCTAGG TTTTACTGAA
GAACTAACAG CGTTGTTGGC ATTAACGCCG AAGAAAAAAC AAACCTTATT ATTTTCAGCG
ACTTTTCCTG AACAAGTAAC AACGTTAACG CAAGAACTGC TTAACAACCC GATTGAAATA
CAATTACAAA GTGCGGATGC CAGCACGTTA GTTCAACGTG TTTTTACCGT GAATAAGGGT
GAAAAAACAG CGGTATTAGC GCATTTGATT CAGCAAGAGC AATGGCGACA AGCGCTTATT
TTCGTTAATG CCAAACACCA TTGTGAACAC TTAGCTGAAA AATTAGCTAA ACGTGGTATT
ACCGCCGCCG TGTTTCATGG CGATAAAGGT CAAAGCGAAC GTAGTCGTGT GCTTGATGGC
TTTAAAGCTG GCGATATTGA AGTGTTAATT GCTACGGATA TTGCTGCCCG TGGTTTAGAC
ATCGAAAAAC TACCGGTGGT CATCAACTTT AACTTACCAA GAAGTCCATC AGACTACATG
CACCGTATTG GTCGAAGTGG TCGTGCTGGC GAAGTAGGTT TAGCCATATC GCTTATCGAC
CATGAAGATT ATCATCACTT CAGCGTGATC GAAAAGAAGA ACAAATTTAG GCTTAAACGT
GAGCAAGTTG AAGGTTTTGA AGCCGCTGAA ATTACCGGTG ATTCAATTTT AGCCGTTGAG
AAACCAATGG CAGCGCCTGA AGGTACTGGT AAGAAAAAAC GTAAAAAGAA AACATCAGTA
AATGCCGATA TCTGGTCAGG ATATTCTAAA CCAGAATAA
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| Protein sequence | MTTVTTPATF TELGLITPLL ARLAELEYHQ PTPIQARAIP SVFAGRDLIA GANTGSGKTA
TFALPMLQKL REDISSGSKN SKGNFVTGLV LVPTRELAKQ VADSIKSYAV HFNGEIKTLA
VFGGVSVNIQ MLALRGGVDI LVATPGRLLD LISSNAIKLD KVKTLVLDEA DRMLSLGFTE
ELTALLALTP KKKQTLLFSA TFPEQVTTLT QELLNNPIEI QLQSADASTL VQRVFTVNKG
EKTAVLAHLI QQEQWRQALI FVNAKHHCEH LAEKLAKRGI TAAVFHGDKG QSERSRVLDG
FKAGDIEVLI ATDIAARGLD IEKLPVVINF NLPRSPSDYM HRIGRSGRAG EVGLAISLID
HEDYHHFSVI EKKNKFRLKR EQVEGFEAAE ITGDSILAVE KPMAAPEGTG KKKRKKKTSV
NADIWSGYSK PE
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