| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3396 |
|---|
| Symbol | |
|---|
| ID | 3518580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3525019 |
|---|
| End bp | 3525333 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637285844 |
|---|
| Product | putative thioredoxin |
|---|
| Protein accession | YP_270071 |
|---|
| Protein GI | 71278810 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.950013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAC TAACATCAGC AGACTCAATA GATGATCTAT TATCTCAGCA TCAATATTCA
CTGTTATATT TTACTGCTTC GTGGTGTGGG CCTTGTAAAT CAATGTCACC CATAGTTGAA
GACGTTTCTG GCTTGATGAA TGGTCGATTT AACACGATTA AAATTGATAT CGATAATATG
GCAAATGTTG CTGCAGATTA TGGTATACGC AGTGTACCAA CGCTGATGTT AGTGAAAAAT
AATGAAATTA TTGATCAGCG TGTTGGTGGG TTGCCACCAC AACAAATGAT GCAATGGTTA
GATAAACTTG CCTAA
|
|---|
| Protein sequence | MKQLTSADSI DDLLSQHQYS LLYFTASWCG PCKSMSPIVE DVSGLMNGRF NTIKIDIDNM
ANVAADYGIR SVPTLMLVKN NEIIDQRVGG LPPQQMMQWL DKLA
|
|---|
| |