| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3380 |
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| Symbol | |
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| ID | 3519852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3514972 |
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| End bp | 3515529 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637285829 |
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| Product | putative sortase family protein |
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| Protein accession | YP_270056 |
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| Protein GI | 71279396 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.583724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCTACTTG TTGCTGGCAG CTTGCTTTGT CTTCATGCGA GCTGGTTGCC GATCAAAGGC
TGGCTCTCTG AGCAATTAAT AAGTTACAGC TGGCATCAGA CAATCGATTT GAAGCAAAAG
ACTAAACCTT GGCCGTGGGC AGATACTTAT CCCATTGCAG AGCTTTCATT TGAACGTTTA
AACAAGCATG TAGTTGTGCT TAACGGCGGT GATCCAACCA CATTAGCTTT TTCAGCCGGT
GCTATTGCTC CCTTTAATCA AGTCAGCAGC GCTCAACCTT TTGTTGTTGC AGGACATAGA
GATAGTCACT TTTCATTTTT AGACGAGGTA GTTATGAACG ATATAATTTC ACTGGCTGAC
AAACATGGTC AAAGCCAGCT TTACCAAGTT GAAGCCATTG ATATTGTCGA TGCATCAACA
GGCGAGCTCC CCATTTTGGC AGATGATTCG CAGCTAATTC TAATCACTTG CTACCCTTTT
ACTAATACTC GTAATATAGG TAATGTTGCT GGCAGTAATA GTAATGAAAG GTATGTGATA
ACAGCAAGAT TGCTTTGA
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| Protein sequence | MLLVAGSLLC LHASWLPIKG WLSEQLISYS WHQTIDLKQK TKPWPWADTY PIAELSFERL
NKHVVVLNGG DPTTLAFSAG AIAPFNQVSS AQPFVVAGHR DSHFSFLDEV VMNDIISLAD
KHGQSQLYQV EAIDIVDAST GELPILADDS QLILITCYPF TNTRNIGNVA GSNSNERYVI
TARLL
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