| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3370 |
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| Symbol | |
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| ID | 3520448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3497800 |
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| End bp | 3499212 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637285819 |
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| Product | alpha-amylase |
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| Protein accession | YP_270046 |
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| Protein GI | 71279985 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.1996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTA CACCCCTATT AAAAAAATTC ACCCAAGCAT CAATCATCGC CAGTTCACTA
TTATTCAGTC AAGGTTCGTA CGCTGATACC ATACTGCACG CTTTTAATTG GACCTATGAT
GACGTTGCAA CCAAAGCGCA AGAGATTGCT GATTTAGGCT ACAAAAAAGT CCTTGTTTCG
CCAGCATACA AATCCTCAGG CGATCAGTGG TGGGCTCGTT ATCAGCCACA AGACTTCAGA
GTTATTCATA GCCCTTTAGG CGATACCAAC GACTTTAAAG ATATGGTTAA TGCCCTAAAA
GCCAAAGGAG TTGAAACCTA CGCCGACATC GTATTCAACC ATATGGCGAA CGAATCATCT
CAGCGCTCAG ATTTAAACTA TCCAGGCACA GCAGTACTCG CTACCTATGC AGCTGATAGC
ACTTATTACA ATTCAATTAA GTTATTCGGC GATCTACAAA CTGGTAGCTA TGGTGCAAAT
GACTTTCATC CTGCAGGATG TATTACTGAC TGGGGCAACC CAGGCCATGT ACAATATTGG
CGACTTTGTG GTGGCAATGG CGATGTTGGA TTACCTGATT TAGACCCGAA TAACTGGGTA
GTTTCCCAAC AACAAGCTTA CTTACAAGCG TTAAAAGCTA TCGGTGTTAC TGGTTTTCGT
GTTGATGCAG CAAAACACAT GAGCAACTAT CACATTAATG CGGTATTTAA TAACGACATC
AAAAATGGCG TACATGTTTT TGGTGAAATC ATTACCTCTG GCGGCGCGGG CGACAATAGC
TACGACGCTT TTCTAGCGCC TTATTTAAAT GACACTGGCC ATAGTGCTTA TGACTTCCCA
CTATTTGCCT CACTGCGCGG TGCACTTGGT TTTGGCGGTT CAATGAACCA ACTTGTTGAC
CCTGCTGCTT ATGGGCAAGC ATTAACACCT GATAAAGCGG TAACATTTTC AATAACCCAT
GATATTCCAA CCAATGAAGG TTTTAGGTAT CAAATATTGA ATGCCACCGA TGAAGTGTTA
GCCAACGCCT ACATAATGGG CCGTGATGGC GGTACGCCGA TGATGTACTC AGATCATAAC
GAAAGTAACG ACAACAACCG TTGGTTAGAT TTATACAAAC GTTCAGACGT TGCTGGCATG
GTGAAGTTTC ATAACACCGC GCAAGGCCAT GGTATGCAAG TGATGAGCTT TAACGACTGT
ATTATTTTAT TCAAACGTGA CCACATTGGT GTGGTGGGTA TTAACAAGTG TGATAACGGC
CAAGATGTGT GGGTTAATAC CGCAGAACAC AATTTATGGT GGAATAAAAA TTACCGTGAT
GTAGTTGAAG GTGTTGATGT ACAAAACATT AATAGCCAAT GGCATAAGTT TTACTTACCA
GGGCGTAAAG CGAGAATGTG GTTAATGGAA TAG
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| Protein sequence | MKTTPLLKKF TQASIIASSL LFSQGSYADT ILHAFNWTYD DVATKAQEIA DLGYKKVLVS
PAYKSSGDQW WARYQPQDFR VIHSPLGDTN DFKDMVNALK AKGVETYADI VFNHMANESS
QRSDLNYPGT AVLATYAADS TYYNSIKLFG DLQTGSYGAN DFHPAGCITD WGNPGHVQYW
RLCGGNGDVG LPDLDPNNWV VSQQQAYLQA LKAIGVTGFR VDAAKHMSNY HINAVFNNDI
KNGVHVFGEI ITSGGAGDNS YDAFLAPYLN DTGHSAYDFP LFASLRGALG FGGSMNQLVD
PAAYGQALTP DKAVTFSITH DIPTNEGFRY QILNATDEVL ANAYIMGRDG GTPMMYSDHN
ESNDNNRWLD LYKRSDVAGM VKFHNTAQGH GMQVMSFNDC IILFKRDHIG VVGINKCDNG
QDVWVNTAEH NLWWNKNYRD VVEGVDVQNI NSQWHKFYLP GRKARMWLME
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