| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3344 |
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| Symbol | |
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| ID | 3518329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3469862 |
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| End bp | 3472237 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637285793 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_270020 |
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| Protein GI | 71277744 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATAA CACACAATAA TTTGCAGAAA AGTACAATAG CAGTTGCTAT ATCTATAGCG
CTTTTCTCTA CAGCAAATGC ACAAGAGAAG CTAGAGGCAG AGGACTCTTC TGGTATAGAA
GTAATATCAG TCACTTCGCA AAAACGTATT CAAAGTATAC AAGATGTTGG TATTTCGCTA
GCTGCTTTTA ATGGCGATAG CTTGCGTGAA CAAGGTATTA ATAACCCAAC GGATATTGAT
AAAGTTATGC CTAACTTTGC CGTAAGAAAC GTTGGCGGTG GCGGTGTACC CGTAGTGATT
ATGCGTGGTA TAGGATTACA AAGTGTTAGA GTTAACGACT CGCCAACCAG TTCTTTTTTT
ATTGATGAGG TTTACCAAAC TTCAATAGCT TCTGCTGAGT TTTCTATGTA TGACTTAGAG
CGTTTGGAAG TACTTATGGG GCCTCAAGGT GGTCTGTATG GTCGTAATAC CATAGGTGGC
GCTATTCAAA TTATTTCAGC CAAACCTGAA ATCGAAGGGG ATTTTTCCGG TTATGCCGAT
TTAGGATTTG GTAGTTTTTC TACTACAGAA CTTGAATTTG GCGTTAACGT GCCTGTTTCA
GATAAATCAG CCATGAGAAT CTCTGGCCGT ATTGATTCAA GCGGAGACAA AGATTATTAC
AGTATTCCTG ATGACGTAAA GCATGGAGAG TCTGATCGTT GGGGCTTGAG AATGCAATAT
TTATATCAAC CAACAAATAA TGTTGATCTA TTGTTTAAGA TACATGGGGG CAACGATGAA
AGTGAATTAC CATTGCAACG TGCTTTAGGG ATTTATAACA ACATAGGTGA CGGTACTGAC
TTAGGTGCAC CTAATGTGTC TCTTGGGTTG TTAAACGGCT TATTTGGCGC TGGCTCCGCG
GGATTATGTC AATCAGTTCT TGATGGTAAG GGTAGTGACC CTGCGACCTG TGCAACCTTA
ACGGGCGTAA CACCAAACGG CTATGGTTTA GATGGCAGTG ATAAGCATGC CTCAGCAACG
GGTGGAAGAC TTTCTTACCT TGAAAACGAA TGGGTTGGTG CAAGTTTAAT TGCCAATATT
GATTTTGATT TTGGTACGTT AACGAGTATT ACTGCTTATG ACACTATTGA TTATTTTCGT
TATATAGATT CCGACTCAAC TATTATTGAA TTTCAAGATA TAGATTACGG TTCAGATATC
AGTTTCTATT CACAAGAATT TAGGTTGGCG GGTCAGGAGA GTGATAGCTT AAATTGGATC
ATTGGTGCTA GCGTCAGTCA TGATGAAATT GTAGAGGATT CTACCTTGCG CGGTGGTGAA
GGTATTTTAC CACTACTCTT TGGGGGAGGC ACGTATTCAC ATCAAGATTA TACCCAAGAA
ACCGATGCTT TCTCCATTTA TGGTCATGCA GATTATGCAT TGGCATCTAC AGTTAACCTC
ATTACGGAAC TGCGTTATAC CGACGAAACC AAGTCATTTT ACGGTGGTTC AACCGTTGGT
TTCCCTAGTG GATTTGAAAC GCCTTTAATT GCCATTGATG ACGAAATAGA CTTTTCCGCA
TTTTCTGGGA AAATTGGCCT GATTTGGCGT GTTGATGAGC AAGCTATGCT GTTTACCAAT
ATATCAAGAG GATTTAAAAC CGGTGGTTTC TTTGGTGGTT TTGCCACAGA CCCAGATCAA
TTAGCTCCGT TTAATGAAGA AACTATTTTG GCTTATGAAG TAGGCTTTAA GTCAGACCTT
CTTGATAACA CCTTAAGAAT AAATGGTTCG GCCTTTATTT ACGACAGGCA AGATGTACAA
CTTAACGCAG CTAACCCAAA TGAAGTTATA AAAATTGCTC GACTCACTAA TATTGGTGAT
GTTGATACAC ACGGCGCAGA ATTAGAAGTT ATCTGGGCTG CCACAGAAGA TTTAACATTT
CAAATAGGAT TAGGTTATAC GGATGCCGAA ATAGCAAAGA GTGATTATAT TGTCAATTCG
GTATTACCCT TGTTAGGTAG TGCACCGCTA GAAGGCTTAA ACTTGCCTAA CTACTCAAAA
TTTAGCAGTA ACTTTTTAGC AAGACATGAG CACGAACTAG GAAATAACTA TATTGGCATG
CTACAGCTTG AATATAGTTA CCGATCTGAA CAAGATTTAT CACTTATCAC AAATGCAAAA
ATAGAAGATC CTATCTTTAA AGAGCCGGCA ATTTCATTAG CTAATGTTCG CTACAGTATT
AGTGATGTAG ATGAACAATG GAAAATTCTG GCTTATATCG ATAATGCTTT AGATGAAGAA
TATCGATTAG AAGCACGTAG TGATGGTTTG TTTGGTGTGC GAGAACGTTA TGCCCTAGGG
CGAACTGCAG GCATAAAATT TACTTATAAT TGGTAA
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| Protein sequence | MGITHNNLQK STIAVAISIA LFSTANAQEK LEAEDSSGIE VISVTSQKRI QSIQDVGISL
AAFNGDSLRE QGINNPTDID KVMPNFAVRN VGGGGVPVVI MRGIGLQSVR VNDSPTSSFF
IDEVYQTSIA SAEFSMYDLE RLEVLMGPQG GLYGRNTIGG AIQIISAKPE IEGDFSGYAD
LGFGSFSTTE LEFGVNVPVS DKSAMRISGR IDSSGDKDYY SIPDDVKHGE SDRWGLRMQY
LYQPTNNVDL LFKIHGGNDE SELPLQRALG IYNNIGDGTD LGAPNVSLGL LNGLFGAGSA
GLCQSVLDGK GSDPATCATL TGVTPNGYGL DGSDKHASAT GGRLSYLENE WVGASLIANI
DFDFGTLTSI TAYDTIDYFR YIDSDSTIIE FQDIDYGSDI SFYSQEFRLA GQESDSLNWI
IGASVSHDEI VEDSTLRGGE GILPLLFGGG TYSHQDYTQE TDAFSIYGHA DYALASTVNL
ITELRYTDET KSFYGGSTVG FPSGFETPLI AIDDEIDFSA FSGKIGLIWR VDEQAMLFTN
ISRGFKTGGF FGGFATDPDQ LAPFNEETIL AYEVGFKSDL LDNTLRINGS AFIYDRQDVQ
LNAANPNEVI KIARLTNIGD VDTHGAELEV IWAATEDLTF QIGLGYTDAE IAKSDYIVNS
VLPLLGSAPL EGLNLPNYSK FSSNFLARHE HELGNNYIGM LQLEYSYRSE QDLSLITNAK
IEDPIFKEPA ISLANVRYSI SDVDEQWKIL AYIDNALDEE YRLEARSDGL FGVRERYALG
RTAGIKFTYN W
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