Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3341 |
Symbol | |
ID | 3521072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3466354 |
End bp | 3466986 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637285790 |
Product | TetR family transcriptional regulator |
Protein accession | YP_270017 |
Protein GI | 71280604 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.113479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGAGA CTCTAACGTC ACAACGTAAA GCGCCAAGTC AAAAACGTGC TCAAACCACA GTAAAAAGAG TGCTAGAGGG CACTTTGCAA CTGTTAAAGG AGCAAGGCGC TGATGCTATT ACGACACGTA ATATATCAAA AATTACTGGC GTTAGTCCTG GTTCTATTTA TCAGTATTTT GGCAATAAAG AGCAAATTTT GTTCACCCTT TATGGAGAGC GATTAAAAGA CTCTGTAGGC ATTTTTAAAT TAGTATCAAC CAAAGAAAAC CTTGCGTTAC CCTTAGCTGA TTTCTGGGCA TTACTAGGTC AAGCTCTAGT TGATGTAGGC TGGGGAAGAG TTGAAGATGT AGAGTTAACA AAAGCTATTG CTGAAAGTCC TTTAGTAAAA GAGGCTGTAA AGCCTATTTT AGATGAGCTT TATGATGGCC TAATCTATAT TATGCGTAGC TATGGCTCAA CTTGGCCTGA GGAAGATCTT AAACATTTAG CCGAATATGC TTTTGGTATT AACCATTTCG GCTATAACTT ACGAATTCGT CAAAGTGGCC AAGCGGCAGA TAAAACTTTA GTGTTAACTC GTGAGATTGA ATATTATCTA ATTTGTAAAG CCGTTAATGA AACTCCACCA TAA
|
Protein sequence | MTETLTSQRK APSQKRAQTT VKRVLEGTLQ LLKEQGADAI TTRNISKITG VSPGSIYQYF GNKEQILFTL YGERLKDSVG IFKLVSTKEN LALPLADFWA LLGQALVDVG WGRVEDVELT KAIAESPLVK EAVKPILDEL YDGLIYIMRS YGSTWPEEDL KHLAEYAFGI NHFGYNLRIR QSGQAADKTL VLTREIEYYL ICKAVNETPP
|
| |