| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3249 |
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| Symbol | |
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| ID | 3521679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3380983 |
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| End bp | 3382260 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637285698 |
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| Product | polysaccharide biosynthesis/export protein |
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| Protein accession | YP_269939 |
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| Protein GI | 71281208 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.594597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTATC ACGCATTTAA CAATTATAAA ATGATACCAG TACTTGTTGC CTTAATAGCG
GCAATAGTTA CACAAGGTTG TGCTAGGCAT TCTTCTGAAA ATATGGATAA ATCTGAACTT
CGATTTTATG GTAATCCTAC TGACAATGGC GATGATTTTA TACATGAAGA AGCCCCCAAT
AGTGTCTTTG CCGATGGCTT AAGTTGTAGT CAGTTTCAAA ACATGGGAGC GGCATTAAAT
TATAGAACTG ATAAACCATT AAATTTAAGC TCATCAAACA TGAAAGCTAC TGCCAAGAAC
GATCCCATTC TGGCACAAGG TTTACTGTTG AGTCCTGGTG ATTTAGTCGA AGTGATTATA
GAAGATGGTG AAGGCTTTAA TGGTCGTTAC ATTGTTGATA ATGCAGGTTA TGTCAAATTA
CCAATTATTG GTGTTGTTGA GGCAGGCGGA GCGACAACCA ATAAATTGGA AACAAAAATT
GAGCTTGCCC TTATTAGAGC AGAAATATTT CAGCCTGATA GTGCAAGCGT AACGATATAT
GTTTTAAATT GGTCATCAAT TGAAGTTGCC GTTGCTGGTG CCGTTTTCCA ACCCGGTACA
GTATTAATCA ATAAAAAGCC CATCGGCATT CAAAATGCAG AACATTTAGA GGCCTATGGT
GATTATTCAA CCACGCGTTT GTTATCTGAA GCCATAAGAG CAGCATCAGG TATTAGACCC
GATGCCAAAT TGGACCAAAT CATTTTGATC CGTAAAGGCT GGCAGGTACA AATAGATATG
ACTGGAATGT TAAGTGGGAA CCTGGTCAAT GATTATCCTT TAGTCGCCGG TGACCGAGTC
ATAGTACCTA GTACAGGTTG TTTTCAAGCT CATTTAGTTA GACCAAGCCA AATTACCCCT
AAAGGTTTTC GCGTGTTTAT GTCTAACCTA ATTGATTCTG CAGGTGATAA TTCTAGTGCC
GGCATTGGCC GATTTTCAAC AAGCCTGCCT TATGGCACAC GCTTACTTCA GGCAGCTGTT
TCAGCTAACT GTGTTGGTGG TAAAGAATGG ACTAATGCAC CACGCAGAGT TGTGCTTTCA
AGTAAAAATC CGATAACGGG TGAAACTCAA GTCATTGAAC GTTCAGTTGA ACAGTTGATG
ACTATGCCGA ATAAAGCGCG AATTAACCCT TATCTGATGC CGAACGATGC GGTTGCTTGC
TACGACTCAG ATATTACTAA TTATCGAGAT ATCGCCAAAA CCCTTACTGA TCTTATTATT
CCATTCAAAT TATTATAG
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| Protein sequence | MLYHAFNNYK MIPVLVALIA AIVTQGCARH SSENMDKSEL RFYGNPTDNG DDFIHEEAPN
SVFADGLSCS QFQNMGAALN YRTDKPLNLS SSNMKATAKN DPILAQGLLL SPGDLVEVII
EDGEGFNGRY IVDNAGYVKL PIIGVVEAGG ATTNKLETKI ELALIRAEIF QPDSASVTIY
VLNWSSIEVA VAGAVFQPGT VLINKKPIGI QNAEHLEAYG DYSTTRLLSE AIRAASGIRP
DAKLDQIILI RKGWQVQIDM TGMLSGNLVN DYPLVAGDRV IVPSTGCFQA HLVRPSQITP
KGFRVFMSNL IDSAGDNSSA GIGRFSTSLP YGTRLLQAAV SANCVGGKEW TNAPRRVVLS
SKNPITGETQ VIERSVEQLM TMPNKARINP YLMPNDAVAC YDSDITNYRD IAKTLTDLII
PFKLL
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