Gene CPS_3234 details

Gene Information

• Locus tag: CPS_3234
• ID: 3519874
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 3362902
• End bp: 3363480
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637285683
• Product: putative lipoprotein
• Protein accession: YP_269924
• Protein GI: 71279417

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.104755
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCCAA TCAAATTATT AGTAATTACC AGCTTAATTG TTTTTACCGC AGGTTGTGCG 
ACAAATTCAG CTAAAGTTAA TTTTGATAAG AACACTGAAA TTGAAACTAT TAACTATAAA 
ACCTTTGCTT GGTTAACTAA TGCTAAGATC ATGGCGGCAC CTGTTGATAT TAACCCTGTT 
ATGAAAGAAA GAGTTGATAA GAGTATCGAA GACGCTTTTA TTGCTAAAGG TTACCGATTA 
GTTGATAACG CTGAAAATGC TGATTTTGCT ATTTCTTATA CAGTAGGTAG TCGTGATAAA 
ATTAAAGTAA ATAGCTATCC AGCAACATAT AACAGCGGAT TTGGTTGGGG ACGCGGTTAT 
TATGGCGGCC GTGGCTACTA CGGTACTATG TCAATGGGTA CAGAAACGAG TGTTAGACAA 
TATACTGAGG GTAAGTTAGC TATTGATGTT TATGATGTTA AAAATCATCA ACCAGCTTGG 
CATGGTTGGG CTACTAAACG TTTATCTTCA GAAGATAAAG AAACACCATC AGCAACATTG 
AATGAAATTG TTATCAAAGT AGTGAACCAG TTTAAATAA 

 

Protein sequence

MNPIKLLVIT SLIVFTAGCA TNSAKVNFDK NTEIETINYK TFAWLTNAKI MAAPVDINPV 
MKERVDKSIE DAFIAKGYRL VDNAENADFA ISYTVGSRDK IKVNSYPATY NSGFGWGRGY 
YGGRGYYGTM SMGTETSVRQ YTEGKLAIDV YDVKNHQPAW HGWATKRLSS EDKETPSATL 
NEIVIKVVNQ FK