Gene CPS_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3233 
Symbol 
ID3520951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp3362001 
End bp3362594 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content34% 
IMG OID637285682 
Producthypothetical protein 
Protein accessionYP_269923 
Protein GI71280485 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0639804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGTT CATTTCTAGC CTGGATGTTT CGCATGCCAT TAATTAAACG ATGGTCATTA 
ATGTTTTGTG TTAAACCAGA AAATATTGCG GAACACTCAC ATCAGGTTGC CATTGTTGCT 
CATTTACTGG CTGTCATTAA AAATAAAAAA TTTAATGGCA ACATCAATGC CGATAAAATA 
TCAACTATTG CCATGTATCA TGAAGCCAGT GAAACCCGAT ACGGCGATAT TGTTAATCCA 
ACAAAGTATG CAAATAAAGA GATAGCTAGA GAATTTAAAA AGATTGAATT ATTAGCAGAG 
CAAGAATGTT TAGCCTCACT TCCTGATGAA CTTCAAGAAC TATTTAGCGA TATTATCGTA 
CAAGATAACG TCTCAGAAGA ATACAAAACG ATTGTTAAAG CTGCTGATAT CATTGTCGCT 
TATATTAAAG CCCTAGATGA GATTAATCAT AAGAATCCAG AGTTTGATCA TGTTGAGCAA 
CGATTAGCGA TAAAAATATC TGAATTAAAA GAAAACATGC CTGAAGTAGA ATACTTTATT 
GATACCTTTA TGGCTGCTTG TTTGGCCACT GTAGATAAGT TATCAAAAGA ATAA
 
Protein sequence
MQSSFLAWMF RMPLIKRWSL MFCVKPENIA EHSHQVAIVA HLLAVIKNKK FNGNINADKI 
STIAMYHEAS ETRYGDIVNP TKYANKEIAR EFKKIELLAE QECLASLPDE LQELFSDIIV 
QDNVSEEYKT IVKAADIIVA YIKALDEINH KNPEFDHVEQ RLAIKISELK ENMPEVEYFI 
DTFMAACLAT VDKLSKE