Gene CPS_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3198 
Symbol 
ID3520919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp3329030 
End bp3329788 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content36% 
IMG OID637285647 
Producthypothetical protein 
Protein accessionYP_269894 
Protein GI71280453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00837868 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAAAA TTTTCTCCTT ACTTTTATTT ACTCTGCCTT TACTAGCTTC CGCTACTGAT 
ATTGAAACGT CACCCTTACC AAAAGCCAAG CAACAACAAA ACTCATTCGC TGAAACTATC 
CCTGCTTTTC GTGCAACTTA TACGCTATTA CGTAAATCAG ATCCTGTAGG AAAAGCTATC 
AGGGAGTTAA GTTATCTTGA TGATGGTACA GTTAAATATC ATTATGAAAC TGATATAAGT 
TGGTTAATAT TTTCTGATAC ACGTAGCGAA ACATCTATTG TTGATATCAA AGAAAACCAA 
GTGATCCCTT TAAGTTATGA CTATCAGCGT GAGGGAACAG GACGTGATAA GTACTATCAA 
TGGCAGTATG ATTTAGCAGG GAAAACAGCA ACAGATCTGA AAAAAGATAA AAAAATATCT 
CTCGATTTTA CTGACGGCCT GCTTGATAAA CTGAGTTATC ATCTACAAAA TCGCATTGAT 
TTAATTAACA ACCCCGAACA AAAGCGGTTT GTATATCCCG TCATTAGTAC AAAGGGATCT 
GTTAAAGATT ATCAATATCT ATATGATGGT AAAGAAGAAC TAATTCTCCC CTATGGCCTA 
GTCAAAACTA TTCGATTAAA ACGTGAAATT GTTGAGAAAA AACGGATCAC CTACGCTTGG 
TTTGCACCCG AGTTAGGTTA CTTGTTAGTA AAGCTCTACC AAGTTAAAGG TGGCTCTGAA 
CAATTTGAAG CACAATTATC AACACTTGAG CTTAAATAA
 
Protein sequence
MRKIFSLLLF TLPLLASATD IETSPLPKAK QQQNSFAETI PAFRATYTLL RKSDPVGKAI 
RELSYLDDGT VKYHYETDIS WLIFSDTRSE TSIVDIKENQ VIPLSYDYQR EGTGRDKYYQ 
WQYDLAGKTA TDLKKDKKIS LDFTDGLLDK LSYHLQNRID LINNPEQKRF VYPVISTKGS 
VKDYQYLYDG KEELILPYGL VKTIRLKREI VEKKRITYAW FAPELGYLLV KLYQVKGGSE 
QFEAQLSTLE LK