| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3107 |
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| Symbol | |
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| ID | 3520926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3251608 |
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| End bp | 3252507 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637285558 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_269805 |
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| Protein GI | 71280460 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.454778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGTA TCAATCGACT AGACATTAAA CAATTGCGCG TATTACAGCT ATTACTTCAG
GAAAGAAATT TGTCAAAAGT TGCTCATATT ATGGGCTTAA CTCAACAAGC GATTAGTGAG
CAACTGAAAA AAATTAGACA TAGCTTTGAT GATGAAATGT TTATACGCAC CAGTAATGGC
GTAATTCCAA CGCAAGTTGC AGAAAGGATG GAACATCGGG TAAATCAGAT ATTGGCGGAT
ATCGACAACT TAATTACCGG CGAAAAATTC AACCCTGCTG AGCTTTCAGG AATATTACAA
ATAAGTTCAT CAGACTATGC GCTAGTCACC ATTCTTCCAA TGTTATTAAC GCAAGTGAAT
GCGTTAGCAC CAAACCTAAA AGTGATCATC AGGGATTTTG AGTCGGATAA TTTAAACCAA
CTGATGGTGA CGGGTGAACT TGATCTTGTG TTTACTTTTC CTGAATTTAT TCCTGACAAC
TACCCGAACA AGCGTTTATT TGAAGACCAT CATGTATGCG TAACAGGGAG TAATTCAATT
TATCGCGGGA AAAAATATAG CTTGTTAGAA CTAGCACAGC TGCCACAAAT TGTTATCTCG
CCTTCAAGAC CGAATTTAAA AGGCTCACAT GACTCTTGGT TTGCTAAACA AGGAATGAAA
AGACATATAC TGATGTCCGT GCCTAGCTTC TCTGCTGCAT CAACCATTAT TGAAGCGACC
AACACCATTG CATTTTTACC ATCGAGACTA TTACCTGATC CTAAGTTAGT TGCGATAGAA
ATTGAACAAA ACCCACCAAA ATTTGACGTT ATTGTTGCCT GGCATCAACG CTCAAATAAT
AATCCGTTAC ACCTGTGGTT ATTGGGCTTA CTGGATAATA TTTTCTGCTC TGCTGAATAA
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| Protein sequence | MSGINRLDIK QLRVLQLLLQ ERNLSKVAHI MGLTQQAISE QLKKIRHSFD DEMFIRTSNG
VIPTQVAERM EHRVNQILAD IDNLITGEKF NPAELSGILQ ISSSDYALVT ILPMLLTQVN
ALAPNLKVII RDFESDNLNQ LMVTGELDLV FTFPEFIPDN YPNKRLFEDH HVCVTGSNSI
YRGKKYSLLE LAQLPQIVIS PSRPNLKGSH DSWFAKQGMK RHILMSVPSF SAASTIIEAT
NTIAFLPSRL LPDPKLVAIE IEQNPPKFDV IVAWHQRSNN NPLHLWLLGL LDNIFCSAE
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