Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3077 |
Symbol | |
ID | 3521946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3208021 |
End bp | 3209763 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637285528 |
Product | putative paraquat-inducible protein B |
Protein accession | YP_269775 |
Protein GI | 71281474 |
COG category | [R] General function prediction only |
COG ID | [COG3008] Paraquat-inducible protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.198785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAATA ACGAATATAC CGATATATCT AATAAAGAGA CTGATGTAAG CCCAGCAAAT ATTGAACAAT TAAAGTCGGT ATCTATGATT TGGTTTGTAC CCTTTGTTGC TTTGTTAATT GGCGCTTGGA TGATTTATTA TCAGTTGAGT AATGAAGGTC CAGTAATCAC CATCGCGTTC GATTCTGCTG AAGGTATGGA GATAGGTAAG ACTAAAATAA AATCCTATAA TGTCGACATT GGTGAAGTAT CTAATATCGT ACTTAACGAA AATGCTGATG GCGTTATTGT AACGGCAAGA ATGACAAAAA ACGCAGAAAA GTTACTTAAT AAAAATAGTG ATTTTTGGCT AGTATCACCA GAAATATCAC ATACCGGAAT TTCTGGTTTA AGTACTTTGA TATCAGGCGT GTATATTGAA TTTTATCCCT CTTCTATTCA TGAAGAAGAA GTAGATGAGT TAACATCAGA GTTTATTGCG CTAAAAGATC CACCAGTAAC TCCTCCCGGA GCACCTGGTT TACATTTAAC GTTAAACAGT AACGACCAGT TTGCTTACTC AAAAGGTGAC CCAATCATAT ATAAAGGCTT AACGGTTGGT CAGTTTGAGC ACATTCACTT TAACTTTGAA GAACGTGTAG TTTATTACAA TGCTTTTATT AAAGCGCCGT ATCATCAATT AGTCACCACC AACACTAAGT TTTGGGATGT TAGTGGTTTA CGGATGGATT TAACGGCCGA TGGTTTATCA ATACAAACCG GTAACATAGA AACCATGCTA ACTAATGGGG TTACTTTTGA TGTACCCAAA GGCATGGAAA ATGGCGAAGA AATTACCGAA CGATCGTACT TTGATATCTA TGCAAATTAT AAGGAGGCTG ACGATGAACG TTATAAATAC TCTGTTGAAT ACATTGTTTT GGTCAGTAAT ACCATTCGCG GTTTGAGTGT TGGCGCCCCT GTTGAATATC GAGGAGTATT AATAGGGCAT GTTAAATCTA TTAACCTACT AGCACAAAGA AATAGCGATA GACCTCAAAT TTTTGATGAA GACATAAAAA TACCAATTTT AATAAGTTTA CAACCCGGAA GAGTTGGCTT ACCCGATAAT GAAATGGGTG TAAGCCTTAT GAAACAGCAG CATCAGTTAT GGATTAAAGA CGGTTTAAGA GCGAGTTTAA AAACGGGTAG TTTACTGACA GGTAGTTTGT TTATTGATTT TCAGCACTAT TCTGATTTGA ATAATGAGGA GGAAAATACA CAAAGAACTG ATTTTGAAAA TAGCCAATAT GGTGAATATA CGATCATCCC TAGTGTTGAT GATGAGTTTT CACAAATTAC CGCGAAGGCA AGCCAGTTCA TCGATAATCT TAATGCTCTA CCATTAGAGA AAATTTCTGG TAATACTAAC GAACTTATTA CTGAATTCAC CCAAACAGCA AAATCATTTC AAAGTGTTAG TGATAATTTA TCAGGCGTAC TTGATGGTGT GAATCAGCAG CAATTGACTC AGGAATTGAA AACGACCCTG CAAAGCTATA CAAAATTAAG TAAAGATCTC TCTGCTGGTT CTAAAGGGTA TGAAGATCTT CGTCAAACAT TATCGGCATT AACTAAGGTC ATGAACGAAT TACAGCCACT TCTTAATCAA TTAAAACACC AACCTAACGG CTTAATATTT GAATCAGGTA AAGTTGATGC GATTGAACCT AAAAAATATA CCCCTAATAA GAAGGCAGAA TGA
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Protein sequence | MTNNEYTDIS NKETDVSPAN IEQLKSVSMI WFVPFVALLI GAWMIYYQLS NEGPVITIAF DSAEGMEIGK TKIKSYNVDI GEVSNIVLNE NADGVIVTAR MTKNAEKLLN KNSDFWLVSP EISHTGISGL STLISGVYIE FYPSSIHEEE VDELTSEFIA LKDPPVTPPG APGLHLTLNS NDQFAYSKGD PIIYKGLTVG QFEHIHFNFE ERVVYYNAFI KAPYHQLVTT NTKFWDVSGL RMDLTADGLS IQTGNIETML TNGVTFDVPK GMENGEEITE RSYFDIYANY KEADDERYKY SVEYIVLVSN TIRGLSVGAP VEYRGVLIGH VKSINLLAQR NSDRPQIFDE DIKIPILISL QPGRVGLPDN EMGVSLMKQQ HQLWIKDGLR ASLKTGSLLT GSLFIDFQHY SDLNNEEENT QRTDFENSQY GEYTIIPSVD DEFSQITAKA SQFIDNLNAL PLEKISGNTN ELITEFTQTA KSFQSVSDNL SGVLDGVNQQ QLTQELKTTL QSYTKLSKDL SAGSKGYEDL RQTLSALTKV MNELQPLLNQ LKHQPNGLIF ESGKVDAIEP KKYTPNKKAE
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