Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3056 |
Symbol | |
ID | 3519687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3192528 |
End bp | 3193751 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637285507 |
Product | hypothetical protein |
Protein accession | YP_269754 |
Protein GI | 71278125 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAA TACTTGCTCT CATACTAATA ATTTACAGTT CGTCTGTGTT CTCTCATTTC TCACACTTTG AGCCAAGAAT CATACATTTA TACCAAGATA ATCAAGACAC AATCATTCTC ATGAGAATGC CACTGCCACT TATTCTTTTA GATGAAAATT GGAAAGGAAT TGATAGCAAG CAAAATATCC CTTATACAAA TAAAGTTAAC AACTCAGGTT ATTTGATTGA CCCAGAGAAG ATCACAAAAA ATTTAGATGA CTTTAAAAAA AGTATTACAC CGGGTTATAC AATTAAAAAA AATGGTGTTG TACAAAATTA TCACATTGAA TCAATCAACA TATTTAATAG TGATGATCGC AAACCATTTA GCAGTTTAAA AACCGCTGAA GAAAATTTTA CTAGTGATGT AACAATAAGA CCCAGCGCCA CAAAACTATT CGATGCGGGC ATTGATATTA AATTACGCAT ATCTAATACC TCAGTAATAA ACGATGATAT CTCGATAAGT AGCATACTTG GAGATAAGTT TAATGCAATT AATAAACTTG CAAACATTAT CAATCTCCAT AGAGACATTG CTAATGAATC TGTAACGACA ACCTTAGGTA TTCTTGATTA TTCATCAACT CATCTGCCTA GCATGACACA ACAATTAATT AACGGCTTTA GCGATGGATT TATTCATATT TTAATAGGGT TAGATCATGT TTTATTTGTG TTACTTCTTT TTTACAGTGC AGCTAGTTTT TTAAAGCTTT TATCACTTGC AACTGCCTTT ACTTTTGGCC ATTCATTCAG TTTATTCTTT GGTGACAACA TAGCCATAGC ATCGCCAATA TTCATACCAG GTATAGAACT ATTAATTGCA CTCACCATTG CTTTCACAGC AATAGCATTA TTGTTGAAAA AAGCGCAGCA TCTAGGAACC ACTCCCCTTT TAGTTATTGG TGTTATTCAT GGTTTTGGTT TTTCATTTGT ATTCAACGAA CTTGAAAAGG AAGGCGCTCA AACAAGCATA ACTAATCTAC TATCTTTCAA TTTTGGTATT GAAGCTGGGC AATTATTTAT CTATGCACTG GCCTTCACGA TGACAATACT TATTAAAAAA CAGACAGTAC TCGTTAAAAA ATTACCTTAC TATGTATCTG TATGTGCACT GGTAATATCA GCTTATTGGG TCGTTACGCG TTCAATGCCC TTATTTGACT ACATAGTAAT CTGA
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Protein sequence | MKKILALILI IYSSSVFSHF SHFEPRIIHL YQDNQDTIIL MRMPLPLILL DENWKGIDSK QNIPYTNKVN NSGYLIDPEK ITKNLDDFKK SITPGYTIKK NGVVQNYHIE SINIFNSDDR KPFSSLKTAE ENFTSDVTIR PSATKLFDAG IDIKLRISNT SVINDDISIS SILGDKFNAI NKLANIINLH RDIANESVTT TLGILDYSST HLPSMTQQLI NGFSDGFIHI LIGLDHVLFV LLLFYSAASF LKLLSLATAF TFGHSFSLFF GDNIAIASPI FIPGIELLIA LTIAFTAIAL LLKKAQHLGT TPLLVIGVIH GFGFSFVFNE LEKEGAQTSI TNLLSFNFGI EAGQLFIYAL AFTMTILIKK QTVLVKKLPY YVSVCALVIS AYWVVTRSMP LFDYIVI
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