Gene CPS_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3056 
Symbol 
ID3519687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3192528 
End bp3193751 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content33% 
IMG OID637285507 
Producthypothetical protein 
Protein accessionYP_269754 
Protein GI71278125 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAA TACTTGCTCT CATACTAATA ATTTACAGTT CGTCTGTGTT CTCTCATTTC 
TCACACTTTG AGCCAAGAAT CATACATTTA TACCAAGATA ATCAAGACAC AATCATTCTC
ATGAGAATGC CACTGCCACT TATTCTTTTA GATGAAAATT GGAAAGGAAT TGATAGCAAG
CAAAATATCC CTTATACAAA TAAAGTTAAC AACTCAGGTT ATTTGATTGA CCCAGAGAAG
ATCACAAAAA ATTTAGATGA CTTTAAAAAA AGTATTACAC CGGGTTATAC AATTAAAAAA
AATGGTGTTG TACAAAATTA TCACATTGAA TCAATCAACA TATTTAATAG TGATGATCGC
AAACCATTTA GCAGTTTAAA AACCGCTGAA GAAAATTTTA CTAGTGATGT AACAATAAGA
CCCAGCGCCA CAAAACTATT CGATGCGGGC ATTGATATTA AATTACGCAT ATCTAATACC
TCAGTAATAA ACGATGATAT CTCGATAAGT AGCATACTTG GAGATAAGTT TAATGCAATT
AATAAACTTG CAAACATTAT CAATCTCCAT AGAGACATTG CTAATGAATC TGTAACGACA
ACCTTAGGTA TTCTTGATTA TTCATCAACT CATCTGCCTA GCATGACACA ACAATTAATT
AACGGCTTTA GCGATGGATT TATTCATATT TTAATAGGGT TAGATCATGT TTTATTTGTG
TTACTTCTTT TTTACAGTGC AGCTAGTTTT TTAAAGCTTT TATCACTTGC AACTGCCTTT
ACTTTTGGCC ATTCATTCAG TTTATTCTTT GGTGACAACA TAGCCATAGC ATCGCCAATA
TTCATACCAG GTATAGAACT ATTAATTGCA CTCACCATTG CTTTCACAGC AATAGCATTA
TTGTTGAAAA AAGCGCAGCA TCTAGGAACC ACTCCCCTTT TAGTTATTGG TGTTATTCAT
GGTTTTGGTT TTTCATTTGT ATTCAACGAA CTTGAAAAGG AAGGCGCTCA AACAAGCATA
ACTAATCTAC TATCTTTCAA TTTTGGTATT GAAGCTGGGC AATTATTTAT CTATGCACTG
GCCTTCACGA TGACAATACT TATTAAAAAA CAGACAGTAC TCGTTAAAAA ATTACCTTAC
TATGTATCTG TATGTGCACT GGTAATATCA GCTTATTGGG TCGTTACGCG TTCAATGCCC
TTATTTGACT ACATAGTAAT CTGA
 
Protein sequence
MKKILALILI IYSSSVFSHF SHFEPRIIHL YQDNQDTIIL MRMPLPLILL DENWKGIDSK 
QNIPYTNKVN NSGYLIDPEK ITKNLDDFKK SITPGYTIKK NGVVQNYHIE SINIFNSDDR
KPFSSLKTAE ENFTSDVTIR PSATKLFDAG IDIKLRISNT SVINDDISIS SILGDKFNAI
NKLANIINLH RDIANESVTT TLGILDYSST HLPSMTQQLI NGFSDGFIHI LIGLDHVLFV
LLLFYSAASF LKLLSLATAF TFGHSFSLFF GDNIAIASPI FIPGIELLIA LTIAFTAIAL
LLKKAQHLGT TPLLVIGVIH GFGFSFVFNE LEKEGAQTSI TNLLSFNFGI EAGQLFIYAL
AFTMTILIKK QTVLVKKLPY YVSVCALVIS AYWVVTRSMP LFDYIVI