Gene CPS_3038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3038 
Symbol 
ID3521687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3174797 
End bp3175558 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content35% 
IMG OID637285490 
Producthypothetical protein 
Protein accessionYP_269737 
Protein GI71281216 
COG category[S] Function unknown 
COG ID[COG4922] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTCGA ATAAAAACAA AATTAGAAAG CTGCTTAACG GCATAGAGAC TGGCGATCCA 
GATGCTGCAT TAGTGGTAAA TGAACAGAAG TACATCCAGC ATAATCCGCA TACAAAAGAA
GGAAACATTG GGTTAGCAGA GCTATTTAAA CAAATAGCAA AGACTGGGCC ACGCGTAAAT
ATGATCCGAG TATTTGAAGA TAAAGATTTT GTCTTTGCAC ATATGGAGTA TCATTTTTCT
ACTTTAAAAG TAGCATTTGA AGTATTCCGC TTTGAGGATG GTTTCGCTGT AGAGCATTGG
GATAATATGC AACTCATGCA AAAGGTTAAT GCTTCCGGTA GAAGCATGTT GGATGGTTAT
CTAATAACAG AAGATCATGA TCTCACTGAG TTTAATCGGA GCAGAGTTTC TTTATTTGCA
AATGAGATTT TAATTAAACG AAAATTGGAT CTATTAATAG ATTTTGTATG TGATGATAAT
TTTATCCAAC ACAGTCCATT ACTTGCTGAT GGTATATCTG CTTTGCGCTC AACGCTAAGC
GCCACATCGA AGCAAAAATA CAAAATAACA TATTCTAAAA TTCATCGAGT CTTAGCTGAA
GGAAACTTTG TTTTAAGTGT AAGTGAAGGG CTAATGGATG AAAAGCACTG TTCATTCTAT
GATTTATATC GTATCGAAAA GGGAAAAATT GTTGAACATT GGGATACTAT TGAACCAATC
CCACCTCGTA CAGAATGGAA AAATGATAAT GGGAAGTTTT AA
 
Protein sequence
MLSNKNKIRK LLNGIETGDP DAALVVNEQK YIQHNPHTKE GNIGLAELFK QIAKTGPRVN 
MIRVFEDKDF VFAHMEYHFS TLKVAFEVFR FEDGFAVEHW DNMQLMQKVN ASGRSMLDGY
LITEDHDLTE FNRSRVSLFA NEILIKRKLD LLIDFVCDDN FIQHSPLLAD GISALRSTLS
ATSKQKYKIT YSKIHRVLAE GNFVLSVSEG LMDEKHCSFY DLYRIEKGKI VEHWDTIEPI
PPRTEWKNDN GKF