| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2941 |
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| Symbol | |
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| ID | 3520685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3074661 |
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| End bp | 3079088 |
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| Gene Length | 4428 bp |
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| Protein Length | 1475 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637285394 |
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| Product | putative DEAD/DEAH box helicase |
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| Protein accession | YP_269641 |
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| Protein GI | 71280221 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAC AAAGCCTAAT TTTATCTTGT CTTGATTTAA TTGAAGAGAA AGAAATTAAA
TTATTAACAT GGGGTGATAC GAGTTTTTAT TTTAATAAGA GTGAGATTAT AGAACTCATA
AAGTTACGAA CACCATCTGA TTGGGAAGAG ATTTTTGAAG AGTTATGTGA GCAAAGCCTA
ATTGTAGAAG TAAAATCTTC TTATATAGTT GATTGTTATC GATCTAGAAT GGCTGAGGCA
ATTTATCTCT ATAGTAATTT GAGACAATGG TTTCATGGAC AAGACCTTAG AAGCGCTAAA
ACATTAGTCT CCGACTTTCG TTTTATTCGT CGACCACGCC AATATCCTAA CAGAAACATG
CCATCTTCAA TGGCTATTAG TCAACTAAAA GAAAAATTGA AACTGTCTAA TGAGCACAGT
AAGGTATTGC TCTCATTATT AGGTGGAGGT AGTAAATCAT TTAACCTTTC TGGTTTTCAA
GTAAGAGCTA CAGAAAGAGT ATTAGATAAG TACTCAAAGC ACATGTCTAG TTCAAGGCCT
AATCAACCTT CGGGAACCAT CGTGTGTTCT GGAACCGGTA GTGGAAAAAC CCTCTCCTTT
TATTTACCTG CTTTGACACA ACTATCACAA AACATTTGCA GTGATCATAG TAATCGAGTT
CAAATATTAG CAATCTATCC TCGAAAAGAA CTACTTAAAG ACCAGTATAA TGAAACGTTT
AAACAAGCAA GGTTATTGGA TGATTACTTG TTAACCAATA ATAAACGAAA AATTAAAATA
GGTACTTTTT TTGGAGACAC ATTAGATGGT GATTATTTAA ATGATAAGCT TAAGTTTAAT
GCCATTGATT TTGATTTATT AAAGTGCAAA TGCTCTGGAA ATTTAAAGTG GTTAGAAGAA
GATGTAAAAT TAAAGAAAGA AATACTGACT TGTAGTCGCT GTGGGCATAA AATTAATGAT
GATGAGGTTG CACTAACTCG ACAATCTTCA GAACCAGATA TTCTTTTTAC AACAACTGAG
ATGTTAAACC AACATCTAGC AAACAGTAAA TATAATCATC TTTTCGGCGT TGATACTAAC
AAGCCAATCC CACTAGTTCT ACTTGATGAA GTTCATACAT ATGAAGGCAC AACAGGTGCC
CAAACGTCCT ATTTACTTAA ACGGTGGATG AAGCGTTCAG ACAATAAACC CCACTTTGTT
GGACTATCAG CAACCCTTAG TGACGCAGCT GGTTTTTTTG GCAGTTTAAC CGGAACAGCA
AAGCATAATG TTGAGTTAAT TGAGCCTCTA CCCTCAGAAA TAATAGAAGA AGGTGCTGAA
TATCTATTGG CTTTGCGAGG CGATCCTGTA TCTCAATCAG CACTTCTTTC AACAACAATT
CAAACAACTA TGCTAACTCG ACGTATGTTA GATAGTAATA GTAATAAAGA GCCTGCATCA
AAAGGCACTT TTGGAACCAA AACATTTGTT TTTACAGATG ACTTAGATGT TAACAATCGA
CTCTTTGAGA TGATTGCAGA TGCAGAGGGG TGGAGTCACG CATTTAAAAA ACTTACTCCT
GAAGCTGAGC CGTTAGCATT TCTCAGAAGC GAAAAGCATC CTAACTATCA GACAAATAAA
GAACAAATTC AACTACTTGG TCAAGATTGG TCGAATTGTG AATATATCGG ACATAGTACA
GACGAAGAAG ATCGTGCGGA AGTAGGTCGA ACTTCAAGCC AAGATTCAGG GGTAAGTGAA
ACGGCTGAAA TTATTGTCGC AACAGCCTCC TTAGAAGTTG GTTACAACGA TGCAAAAGTT
GGAGCTGTTA TTCAACACAA AGCACCAAGG GGCGTAGCAT CATATCTTCA ACGTAAAGGG
CGTGCAGGGC GATCTCGAGG TATGAGACCT TGGATGATTA CAGTCCTTTC TGATTATGGG
CGTGACAGAG TAGCTTTTCA TAGATATGAA AATTTGGTAG ATCCAGAAAT TAAAGTGAAC
AAACTACCTG TCGGAAATAA CCATATACAA AAGATGCAAG CAAGTTTGGC CACTTTGGAG
TGGTTAGGTA GAGAGGTTGG TAAAGGAAGT ATTTGGTATT ACCTAAGGAA TCCCAACCAA
TATTCAAATA ATAAAAAATA CCTTTATAAA TTAGAGAAAG CTATCAATGC CTTGTTAGAT
GGTTCAAGTA AGAAGAATTC ATTAACAGCC TATTTGACTT CATCTCTTGG GATTAATAGT
CAGGAAGTTG AAAAGCTTTG TTGGCAACCT CCGCGCTCTT TATTAATGGA CTTCTTACCC
AGCTTATTAC AAAAGCTACG AACTAATTGG TCTGTAAATG GGCAAGAGTG GTTAGGTGTT
CAAAGTAAAG GTTCACCTAT GCCTGAGTTT ATACCTGCTA CATTATTTAG TGAACTAATT
CTCCCATCAC TTGATATCTC CTTACTTAGG GGGAGTAAAG AGGAGAGAAC TCAGGAATGG
CAAAGTATGG GGTTCTTTCA GGGATTAAAA GAATATGCTC CGGGAAGAAT TTCGAAACGA
TTTACATTAA ATAACCGTTA TGAAACTGAT TGGCTAGTCC CTGAAGGTTT TGAGCCAGAG
GTAGGAGTTG ATGGTGAAAT AGGCTTCGAA GTTGAAGATG CTTTTGGACT AAATAGAGAC
TTTATTAAAG AAATAATTTA TAAGCCTGGT ACTCAGATGA AAATCTATCA ACCAAGGCAA
ATACTAACGA AACGACTTGA ACTAAAGAAT GTTACAGAAA CAAGTAATGC TTTTTTGAAC
TGGGAGAGCA TATTTGAAAT TGATGAAGAC AAGCATCAAC TGTCACTTCC TGCTAATTGT
GACTGGAAAC GTCATTTAAG TAATGTTTGT TTTTTTGAGC ACAAACATAT GCAACCAGTT
GAGGTTACAA GGTATACAAC GGGATCTAAT GCTCAGATTA AATTTAAGAC TAAAGAAGCA
TCTAATATTA AATTAAATTG GCAAGAACAA GGTGAATCAG TTGGTATTGG GACTATTCTC
TTTGTCGATG GAATGAGGTG GAACTTTACA TTCTCAGATG AGCAGTTACT TAGTTTAGGG
ACAAATGAAA ACGTTGAGTC TTCTTTACGC TTTTCTTTTG TTCAAGATTG CTTTGTAAAT
TCTTCTATTT TTAACAATAC ATTTCAAGCA AATTGGGTAT TTGAGTGTGT TACTACCACA
GTGATATTCA TTTCAACGCA AAAAAACTTA TCTATTCAAG ACTCTATTAC GTTTTTGAGT
TCAAAAGAAG GACGAGAGTT ACTAAATACT ATCCCTCTAG AATTATTTCA ATTGAATGTA
TTAAGTGAGG ACGAAGATGA AGAGCAGGCG TTACAAAGTG AGTTGATTTC CCTTTTATCG
AACGATTTAA TTATTGGTGA AATTAGTAAC TTATTAACCC CTTTATATAC TGAATTGTCA
GGTGATTCGT ATATTTCATG GTTGAGAATA TTAATGTCAA ATACCCTCTC TGGAGGCATT
AATCAATTGG TAAGTACGGT ATTACCAGAT GTTGGTGATA ATGATTTAAA TGTAGATCCG
GTATGGATGG GTGATGACTT AACTATTTGG TTAACTGAGA ATGAATCAGG TGGGGTAGGT
ATAATTAATA GGTTTGAGAG GGTATACAGT AGTGATCCTC TTAATATTCT AAATCATTTC
TCTAGATGTT TTCAGGCAGG TGATTATGAG CAGGTTGATT TTGATATTCA TCAATTATTA
TCAAAATTAG AGTGTGACGA AAATTTAGAA TCATCTTTTA AGTCTCATAG AGACTCACAA
AAATTTAGTG CACGAGTTAA AGCAAATGTG GCTATTAATG AAAACTTAAG AAAGATGGGA
GTCATTTTAT CTCATAGCTT CAATAGCATT CTTCATACTC GAGTATTAAA AGCCGGCAGT
TCTAAAGAAA CAGATAGAGA TTTAAAGAGC TGGATGGACA GATGGCGAGA AATTGAAAAA
GAGTTAAAAG TAGAGATACC TTTAAACATA GCATCTTTTC TAATAGCTAA AGAAATTACA
TCGGATACGA ATGTAACTAT AAACAAGCTT AAAGATAAGG TCATTGGGCA GTTATGGCCT
AGAGGCAATG TTATACGTCA GTCCAGTACA CAGTTTTATA ATCGCTTCAT AAGTGGAAAT
AATAGAACAG AAAGGCTAAT TGTCGAACAA ATGATATCTG GCAATAGTGA AACAATGAAT
TATGGAAATA ACTGGGAGGG AGAATTACAA CAAAGAATTA GTCGTAAAGG GATAGTTAAG
CTTGTAATTT CATCTGAACA CTTATCTAAA TTAAATCAAA TTATATTAAA AATAAATACA
ATTCAGATAG ATCAACTAGG TATGTTTTTC CACATTAGGG TTAATAGAAT TGATAGACAA
TTAGGTGAAA TAATATTATT TGTCGAGCTG GCGGAGGCTA TTCAATGA
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| Protein sequence | MIEQSLILSC LDLIEEKEIK LLTWGDTSFY FNKSEIIELI KLRTPSDWEE IFEELCEQSL
IVEVKSSYIV DCYRSRMAEA IYLYSNLRQW FHGQDLRSAK TLVSDFRFIR RPRQYPNRNM
PSSMAISQLK EKLKLSNEHS KVLLSLLGGG SKSFNLSGFQ VRATERVLDK YSKHMSSSRP
NQPSGTIVCS GTGSGKTLSF YLPALTQLSQ NICSDHSNRV QILAIYPRKE LLKDQYNETF
KQARLLDDYL LTNNKRKIKI GTFFGDTLDG DYLNDKLKFN AIDFDLLKCK CSGNLKWLEE
DVKLKKEILT CSRCGHKIND DEVALTRQSS EPDILFTTTE MLNQHLANSK YNHLFGVDTN
KPIPLVLLDE VHTYEGTTGA QTSYLLKRWM KRSDNKPHFV GLSATLSDAA GFFGSLTGTA
KHNVELIEPL PSEIIEEGAE YLLALRGDPV SQSALLSTTI QTTMLTRRML DSNSNKEPAS
KGTFGTKTFV FTDDLDVNNR LFEMIADAEG WSHAFKKLTP EAEPLAFLRS EKHPNYQTNK
EQIQLLGQDW SNCEYIGHST DEEDRAEVGR TSSQDSGVSE TAEIIVATAS LEVGYNDAKV
GAVIQHKAPR GVASYLQRKG RAGRSRGMRP WMITVLSDYG RDRVAFHRYE NLVDPEIKVN
KLPVGNNHIQ KMQASLATLE WLGREVGKGS IWYYLRNPNQ YSNNKKYLYK LEKAINALLD
GSSKKNSLTA YLTSSLGINS QEVEKLCWQP PRSLLMDFLP SLLQKLRTNW SVNGQEWLGV
QSKGSPMPEF IPATLFSELI LPSLDISLLR GSKEERTQEW QSMGFFQGLK EYAPGRISKR
FTLNNRYETD WLVPEGFEPE VGVDGEIGFE VEDAFGLNRD FIKEIIYKPG TQMKIYQPRQ
ILTKRLELKN VTETSNAFLN WESIFEIDED KHQLSLPANC DWKRHLSNVC FFEHKHMQPV
EVTRYTTGSN AQIKFKTKEA SNIKLNWQEQ GESVGIGTIL FVDGMRWNFT FSDEQLLSLG
TNENVESSLR FSFVQDCFVN SSIFNNTFQA NWVFECVTTT VIFISTQKNL SIQDSITFLS
SKEGRELLNT IPLELFQLNV LSEDEDEEQA LQSELISLLS NDLIIGEISN LLTPLYTELS
GDSYISWLRI LMSNTLSGGI NQLVSTVLPD VGDNDLNVDP VWMGDDLTIW LTENESGGVG
IINRFERVYS SDPLNILNHF SRCFQAGDYE QVDFDIHQLL SKLECDENLE SSFKSHRDSQ
KFSARVKANV AINENLRKMG VILSHSFNSI LHTRVLKAGS SKETDRDLKS WMDRWREIEK
ELKVEIPLNI ASFLIAKEIT SDTNVTINKL KDKVIGQLWP RGNVIRQSST QFYNRFISGN
NRTERLIVEQ MISGNSETMN YGNNWEGELQ QRISRKGIVK LVISSEHLSK LNQIILKINT
IQIDQLGMFF HIRVNRIDRQ LGEIILFVEL AEAIQ
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