| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2875 |
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| Symbol | |
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| ID | 3518945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3008932 |
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| End bp | 3010317 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637285328 |
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| Product | Orn/DAP/Arg decarboxylase family protein |
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| Protein accession | YP_269580 |
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| Protein GI | 71278455 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.467454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAATTG CACTTAAACC CTATCATCGG CCAATTATAG AGGTTTTGCC ATTTTTGGCT
TTGGAGAAAC ACCAACTCCA TAATATAACG GTAGCAGCAG ATGAACCCTT AACTCTGGAT
ACTGTTGGGT TATTGCAAAA GTTTGGCTCT CCACTTTATG TAGTTTCAGA ACAAAGATTA
CGTCAAGATT TTAAAAACTT CAAACGCAGT TTTAGTGATG AACACGTTAA AACCAAAGTG
GCATATTCCA TAAAAACTAA TTACTTACCA GCAGTTTGCG CCATTCTTCG TCAAGAAGGT
GCCCAAGCTG AAGTAGTTTC TGGCATGGAA TATGAGTTAG CACGCACCTT GGGTATCCCG
GGCAAAGATA TTATATTTAA CGGGCCCCAT AAAACTCAGT CAGAACTGAA ATTGGCACTT
AGCGAGGGGG CGTTAGTAAA CATTGATAAT TTCAATGAAC TAGAACACAT AGACAGAATT
TCTGAGGAGC TCATTACCCC TGCTAGAGTG GCTATTCGAG TGAATTTTCG TTATGGCACC
AACCCATGGA CCAAGTTTGG CTTTAACAAT GAAAATGGAG AAAGTTTAAA TGCGCTGAAA
AAAATCGCTC GCAATAAAAA ACTACAATTT GAAGGCTTCC ACTGTCATGT GGGTACCTTT
GTTTTGGTCC ATGAACTTTA TGCCAATGCC GTCGAAAAGC TCATAGAATT AGCAAAACAA
GCACGAGAAA TAGGGCTCAA CCCGACGAGT ATAGATATTG GTGGGGGCTT TCCTTCGGCC
AATACGCTTA GACCTGAGTA TGACTTACCC GGAGGCAGTC AACGTGCAAA TAATGATTAC
TTGCTACCTT ATGCGGAACA TATTTTCGGG CAATTACGTA AACATAGTGA GTTGTTTGGA
AATAACCCAA CATTGATACT AGAGCCTGGA CGAGCGATAG TCGATGCCTC GACACAACTC
TTAAGCACCG TCATTGCAAA GAAAGAAATA GTTGGAGGTC GAAACGCGGT TATTATTGAT
GCAGGGGTTA ATCTGGTTCC TACCGTTTGT TACTACAATC ATCAAATAAA GACAGTTGCC
GCAACGAAAA GCGAAGAAAG AGGGTTATTA AAGCCAGTCG ATATCTTTGG TCCTTTGTGT
ATGCAAAGTG ATAGATTGCG TGAGCAAATA TTGATGCCTG CATTAAATGT CGGCGATCAT
CTCAGTATCG GTAATGTTGG TGCATATTGC CATACTCAGT CGAATCAGTT TATTCAACCC
AGACCCGCGA CCATATTATT AGGTGAGCAT GGGCCAGAAC TTATAAGACG TGCCGAGACT
TACAAAGATA TATTTGCGCT TGATCTATTA CCAGGCCGAC TGCGTGATGA TAAATGTCAA
TTTTAA
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| Protein sequence | MTIALKPYHR PIIEVLPFLA LEKHQLHNIT VAADEPLTLD TVGLLQKFGS PLYVVSEQRL
RQDFKNFKRS FSDEHVKTKV AYSIKTNYLP AVCAILRQEG AQAEVVSGME YELARTLGIP
GKDIIFNGPH KTQSELKLAL SEGALVNIDN FNELEHIDRI SEELITPARV AIRVNFRYGT
NPWTKFGFNN ENGESLNALK KIARNKKLQF EGFHCHVGTF VLVHELYANA VEKLIELAKQ
AREIGLNPTS IDIGGGFPSA NTLRPEYDLP GGSQRANNDY LLPYAEHIFG QLRKHSELFG
NNPTLILEPG RAIVDASTQL LSTVIAKKEI VGGRNAVIID AGVNLVPTVC YYNHQIKTVA
ATKSEERGLL KPVDIFGPLC MQSDRLREQI LMPALNVGDH LSIGNVGAYC HTQSNQFIQP
RPATILLGEH GPELIRRAET YKDIFALDLL PGRLRDDKCQ F
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