| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2816 |
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| Symbol | |
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| ID | 3519140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2947326 |
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| End bp | 2947904 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637285269 |
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| Product | putative RNA polymerase sigma-70 factor FecI |
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| Protein accession | YP_269528 |
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| Protein GI | 71278260 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0479904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAGAA ACTCGACATT AACAAACCTT TTTCTAAGTA CTAAAAGAAA TATGGGCCGT
TTGATTAGTC ATATCGTCAA AGCTGACGAT ATCGATGATA TCGTCCAAGA AACCTTTATT
AAGACTTATG AAGCCGACTT AAAGCAAGAA ATTAAGTACG TTCGCAGCTA TATGCTCAAA
ACGGCAAAAA ACCTTGCGTT GAACCATGTA GCTCGATGGG ATAATAAATA TAATGATTCT
CTAGAGGATT TTTCTCAGCC ACCTGTTCAA TTAACTAGCG GAAAAGTTGA AGACGATTAT
GAAAGCAAAG AACAGTTCTT ATTTTTTTGT CGAGCAACGG ATCAACTATC AGGTTCAGTG
CGTAAATGTT TTATTTTAAA AAAAGTTTAC GGATTAAGCC AAAAAGAAAT TGCTAGCTAT
TTAAATTTGA GTGAGAGCAC AGTCGAAAAA CACATAGCAC AGGGTCTCCT TAAAAGTACA
AAGTATATAA AACGAATGAA TCACGGTCAT AGTGTTAAAG GTGCTAAACA AAACCACCAA
GTTCATAGCC TCCAAGTAAA AAAAACAGTT TTGAAATAG
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| Protein sequence | MARNSTLTNL FLSTKRNMGR LISHIVKADD IDDIVQETFI KTYEADLKQE IKYVRSYMLK
TAKNLALNHV ARWDNKYNDS LEDFSQPPVQ LTSGKVEDDY ESKEQFLFFC RATDQLSGSV
RKCFILKKVY GLSQKEIASY LNLSESTVEK HIAQGLLKST KYIKRMNHGH SVKGAKQNHQ
VHSLQVKKTV LK
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