Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2773 |
Symbol | |
ID | 3519234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2893248 |
End bp | 2894180 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637285226 |
Product | putative lipid A biosynthesis acyltransferase |
Protein accession | YP_269485 |
Protein GI | 71279266 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0134312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAACGTCA CCATGACAGT TAACAATTCA GAGAAATTAG AGTCTAGTGT TATGGAAAGT GTGCCGCTAA TGTCATTTAA ACAAAAGTCA CTCAGTAAGT TATTGAGATT ACTGCTTGCA GGTTTAACCA AGCTAACAAG AAATAAGCGT AAAACGCTGA TCAAACATAT CGGCAAAACC CTATTATATT TTGCTAAAAA AACACGAGTG AGAGCGATAA AGAACATTAC TAAGGCAATG CCCGAACTGA GTATGAAAGA AGCCACCAAT TTAGCGTTCG ATGCTTATGG TAATTGCGCC TTCGGCGTGG CTGAATCTTT TTGGCTTTGT GAGGTTGAAC CTGACATTTT CTGTGACGAG GATACTTTAC GTATTTTACA ATCAGGTCAA GGGGCGTGTA TTGCAACTAT GCATTTGGGT TGTTATGAAG CAGTGCCATT AGCAGTAGCC AAGTTTGCTA AAGAATCTGT TACCTTAACC AATATTCCGC GCTTCTTAGC AGACTCAATG GACTTTTATT CTGCCGTTAA TATTACCGCT ATCAATAAAA ATTCAAGCAG TGCATTTAGT GAGCTATTAA AAATGTCAGG TGGTAATGCT TATCTTTCTT TGCATTGTGA TCTTTATGCA AACCAAACAG ACGTAACCTT CTTTGGTCAA GAAACTAAGG CGCCCGCAGG TATAGCGTTA TTAGCAAAGA TGACCAATAA ACCTCTCCTG TTAGCTTACG CGGTTTATCA AGGAGACGGA CAAGTACAAG TGTTTTTTGA AACCTTATAC CTAAATCCAA ACCTAACTAG TCAAGCATCA GAAGAGCAAG AAACTGAACC AACTGTTGAG CAAATAATGG CAAAAATTTA CCGACGGTTT GAGCAAATAA TCAAACAATA CCCAAATCAA TGGTATTGGT CATATAACCG TTGGAAAAAT TAA
|
Protein sequence | MNVTMTVNNS EKLESSVMES VPLMSFKQKS LSKLLRLLLA GLTKLTRNKR KTLIKHIGKT LLYFAKKTRV RAIKNITKAM PELSMKEATN LAFDAYGNCA FGVAESFWLC EVEPDIFCDE DTLRILQSGQ GACIATMHLG CYEAVPLAVA KFAKESVTLT NIPRFLADSM DFYSAVNITA INKNSSSAFS ELLKMSGGNA YLSLHCDLYA NQTDVTFFGQ ETKAPAGIAL LAKMTNKPLL LAYAVYQGDG QVQVFFETLY LNPNLTSQAS EEQETEPTVE QIMAKIYRRF EQIIKQYPNQ WYWSYNRWKN
|
| |