| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2666 |
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| Symbol | |
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| ID | 3521984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2778213 |
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| End bp | 2779376 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637285120 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_269380 |
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| Protein GI | 71281512 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAAA TAAATCAAGT AAAGCTAACA CAAGTAAACT TAGCTCAAAT AAATACTGCA
AAAGTAAATA CGATACCAGC AAAAGTAGTA CATAAAATGA TGAAAAAAGT AGTAATAACT
ACCCTAATTG CAATGAACTT AATGCAAGTA AGCTTTGCTG CAGATGTTGT TGAAAAAAAC
GAAACAAAAG TCGTCGCAAA ACCAGTAAAA GTAGCACCTG TGCTCAATAT GCCCATGGCA
GCAAAAACTG AACTCAACGC GACCTTATAT AGTAGATCAC ACATCCCAAT AACGGCTTCA
CTAAACGCGA GAGTAGATTA CTTAGTTGAA CCCGGGGACT TTGTCGCACA AGGAGATAAA
CTTGCGGGAA TGGATTTATT ACCTATTCAA CTACGACAAG CAGAACAAAA GGCGCAGATA
AGTCGAGCAA GAATCAATGT CGCTTATATA AAAAATGAAT TGTCACGTTT ACAAGCACTG
AGTAAAACTC AAGCTGTCTC GCAATTTAAG TTAGATCAAA TGCGTTCTGA GCATGATTTA
GCAGCGGCTG ATTTAGAAAT TGCCCAATTA AAATTGGCAC AAATTAATGA ACAATTATCA
CGTGCCATCA TTACCGCACC ATTTGCCGGA ATCATCACCG AGCGCTTGAT AAGAGTGGGT
AGTGAAGTAA ATCGTGGTGA TATTTTACTT AGATTACTTG ATACCGAGCA TTTAGAAGCG
CGATTATACA TCCCGATTAA ATACCTAGCT TTCATCAATA AAGGTGACAA ATTGAGTATG
TCAGCAAGCG ATCAAAAAAC CTTGGCTGCT GTTACGGCTA AAATCCCAAG AGCTGATCCA
AGATCGCAAA CCTTTGAAGT TAGACTTAAT ATACCCAAAG CATTTAATAA ACACTGGGCT
GCAGGCCAAC TTGTTAGTGT TAGCGTGCCG ACTCAAAAAG CAACAGCAAG CTTAACTGTG
CCGCGCGATG CACTTATTTT GCGCAAAAGT GGCAGTTACG TAATTAAAGT GAATGCAGAC
AATACCGTAT CTCGTTTAGC CGTTGTTGTG GGTAAAGGAA ATAAAGAACG CGTTGCGATA
ACCGGTTCAC TAAAACATGG TGATAATGTT GCGATAAGAG GTGCAGAAAG ACTAGCCGAT
GGCGATAAAG TTGTAATTCA ATAA
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| Protein sequence | MLKINQVKLT QVNLAQINTA KVNTIPAKVV HKMMKKVVIT TLIAMNLMQV SFAADVVEKN
ETKVVAKPVK VAPVLNMPMA AKTELNATLY SRSHIPITAS LNARVDYLVE PGDFVAQGDK
LAGMDLLPIQ LRQAEQKAQI SRARINVAYI KNELSRLQAL SKTQAVSQFK LDQMRSEHDL
AAADLEIAQL KLAQINEQLS RAIITAPFAG IITERLIRVG SEVNRGDILL RLLDTEHLEA
RLYIPIKYLA FINKGDKLSM SASDQKTLAA VTAKIPRADP RSQTFEVRLN IPKAFNKHWA
AGQLVSVSVP TQKATASLTV PRDALILRKS GSYVIKVNAD NTVSRLAVVV GKGNKERVAI
TGSLKHGDNV AIRGAERLAD GDKVVIQ
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