| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2634 |
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| Symbol | |
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| ID | 3521530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2734836 |
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| End bp | 2738768 |
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| Gene Length | 3933 bp |
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| Protein Length | 1310 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637285088 |
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| Product | extracellular ribonuclease/nuclease fusion protein |
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| Protein accession | YP_269348 |
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| Protein GI | 71281061 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG2356] Endonuclease I
[COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACTC GTAAGGTAGT GCCAAGTCTA TTTTTTGGCA AAAATAAATT AAAATTAAAC
TCGATTGCAC TTTGTGTTGC TTCAAGCTTT GTTAGCTACA GTGCTTTAAG TGCTGAAACA
CTGTGGTCTG AAGACTTTTC TGACCCAGCA TTAACCAATA AAGGAGCAGT TTATGAAACC
ATCGATATGG ACGGTGTTAC TCGCTGGTCT ATTGATGTTA CTAATGCACA ATTAACAGCA
AACAGTGATT GGTTTAAAGT CACGAATAAT AAAGTCGAAG CAAGAGATGT AGATGGCAGT
GTAGATTGGC TATCGGAGAA AATTGATATT CAAGGCAAGC AGAATATTAA CATTTCTGTG
TTAGCAGAAG AAAGTGGCAC CCTTGAATCA GCTGATTTTT TTGATCTTTC CTATTCAATA
GATGATGCGC CTTTTGTTAA GGTAGAAAAC TGGCAAGGTA AAGGCAGCAG TAGTCACACA
TTGATTGATG ACTTTACGTC TGCAGCCATA ACACAAAGCA TTGCAGAAGG AAGTACGCTT
CAAATTAAAG CTTCTATGGC AAACAACTCT GGCTCTGAAT ATATTCGTTT GGATAACGTA
CTCGTTACTT CTGGTGTTGA AGATGGAGGA GGTGATAGTA GTCAAGGTCC AGTCACAGAT
GCTTGTTATA ATTGCCCAGA CTTAAGCACG ATAGAAAGTG CAGAAGACTT TGTTGATGCT
ACCTATTATG CCGCTGTGTT TAACGCCATT GATTCTGTAC AAAGTACCGA GGTTATTCGA
ACCAACATCA ATGAAGTCAT CTCAGCAAAT CATAAGCAGT TAACCTATTC AGAAGCATGG
ACAGCATTAA CTGTTACTGA TGAAGACCCG ATGAACCCTG ATAATGTTAT CTTATTTTAT
CGTGGTATTT CTAAAGCAAA AAATTCCAAT GGTAGTGGTT CACAATCGAC CAACCCTGAT
AACTGGAACC GTGAACATGT TTGGGCAAAA AGCCACGGCT TCCCAAGTTC AAGTGCTATG
GCTTATTCAG ATATTCACCA CTTAAGACCG ACGGATATAT CCGTTAACTC TTCAAGAGGT
AACTTAGATT TTGATAATAG TGATGCACCT TTACCAGAAG CTCCAGATAA TCGCGTAGAC
GGAAATTCAT TTGAACCAAG AGATGCTGTA AAAGGCGATG TTGCTCGTAT CGTTTTATAT
ATGGATACTC GTTATGCCGG ATTAGATTCT GTAACACCCG ACCTACAAGT TGTCGATACC
TTAACCTCTG GTGGTGAAGC CAAATTAGGT AAGTTATGTA CTTTGTTAGC GTGGAGTGAA
GAAGATCCGG TTGATGAGTT TGAAATTAAT CGAAATAATA AAATTTATGA GTTTCAAGGA
AATCGTAATC CATTTATTGA TCACCCAGAA TGGATTTCAA CGCTATATAG CGCATCATGT
TCAGAGGTTG ATCCGGTCGA CCCCGTTGAT CCAGTAGATC CTCCTGCAAC GGGAGTTGAT
TTGTTTTTCT CTGAATATGT TGAAGGTTCT AGCTTTAATA AAGCAATAGA GATTTATAAC
CCAACAAACA GTGCAATATC ATTGGCGGAT TATCAATTCA AGCTTTATTC AAATGGAAGT
CTTACCGCTA CTGGTACCTA TACATTAACG GGTGAGATAC TTGCTAATGA TGTGGTGGTA
CTTGGCTCTA GTCAAATTGC AGATGATAGT TTATTAGTAC CATTTATCGA CCATTTTGTA
AGTGCTGTTA ATTTTAATGG TGATGATTAT GTAGAGCTCG TACATGGCGA TACGATTATC
GATAATATTG GTACTTATGG TGTGAGAGAA AATTGGGGTA AAGATACTTC ATTACTACGT
TTATCTTCAA TAACATCAGG TGATACCGAC CGAATGGATG AATTTATTAA AGCAGATCAG
TGGCAGTCAA ATCCTAAAGA TACTTTTGAA AATTTGGGCT CACATCTCGC TGATACTTCT
CCGACAGATC CTGGTACAGG TGAAGATCCT GTTATTGGAA TGTGTGGTGA TGAAGCTGAC
AAAATTAATG TAATTCAAGG CAGTAGCAAT GACTCAACCG TTATTGGTGA AGTTAAAGTT
ATTGAAGGCT CTGTTACGTC AGCCGTGCCA AGCTTAAAAG GGTATTTTGT ACAAGAAGAA
GCAGACGATA CTGATGCTGA TTTGATGACC TCTGAAGCAA TATTTGTTTA CTTTAATAAC
ATTGCTAACT TCCCCACAGA GGGCAATAAA ATAAGAATAC TTGGTACCAT CAAAGAGAGT
TTTGGCCGTA CCCAATTGAC GGCGACAACA GACTTTATTG ATTGTGGTGT TGGTGAATCA
ATTGAGCCTA CAATGGTGTC TTTACCGGTT TCAAGTATCG ATTACTGGGA AACTATCGAA
GGCATGTCAG TGAGCTTTAA CGATACTTTG AAAGTTAGTG ATACTTATAA TCTGGCTCGT
TATGGTCAGC TAACGCTGTC TAATGGACGC TTGATATTGC CTACCAATAT TTATAACGCA
GGTAGCGAGC AAGCTATTGA TTTAGCGGAT AAAAACAGCC GAAATAGAAT CACATTAGAT
GATATGAACA ACGCGCAAAA CCCTGACAAT GTACCATTTC CAGCACCTGG ATTGAGTCAT
GAAAATACTT TACGTTTGGG CGATTCTGTT ACGGGTTTAA CTGGTGTCAT TGATTATAGT
TTCAATCAAT ATCGTGTGTT GCCAACAACG ACACCACTAT TTAGTACGAC AAATGTGAGA
ACAACACAAC CTGATCTCAA TGAAAGTGGC TCCTTAAAAG TAGCAAGCTT TAACGTTTTA
AATTACTTCA ATGGAGACGG TGCTGGTCAA GGTTTCCCTA CTGCGCGCGG TGCAGATACG
CTTGAAGAAT TTACCCGTCA AAGCAGTAAA ATTGTGTCTG CACTAAAAGA AATTAATGCA
GATATTGTTG GACTGATGGA GTTAGAAAAC GATGGTTTTG ACAGCAATTC TGCCATAGCA
GATCTTGTTA AACAGCTAAA TAGTCAAGTA GGAGAAGGGA CATATAACTA CGTTAGTCTC
GACCAAACAG GTGTTGGTGG CGATGCCATT GCAGTAGGAA TTATTTATAA ACCCGCTACT
GTCGGAATAG TGGGTAATGC TGTTACTACT AATCAAAGCC CATTTGATTT TGGTAACCGT
CAACCGCTGG TTCAAACCTT CAAAGAAATA GCGTCGAATG AAGAGCTAAC CATTGCGGTT
AATCACTTTA AGTCGAAAGG AAGTTGTGGC AGTGCCTCTG GCAATAATCT TGATCAAGGA
GACGGTCAAG GATGTTGGAA TGAGTTGAGA ACACAAGCAG CCAATGGCTT AACGGCTTGG
TTAAACACAA AACCTACGGG CACTAGCGAT GATGATTTCT TAATTATTGG TGATTTGAAT
GCTTACGGTA AAGAAGATCC AATTAATGCG ATTACCAACA GTAATTATCA TAATTTAGTT
GCTGACTATA TGGGAAGTAC TGGTTATTCG TATAGTTTTG GTGGTGAAAT TGGTTATTTA
GACCATGCCC TTGCAAGCGA TAAGTTAGCT AGTCAAGTAG TAGATACTAC CGTATGGCAT
ATCAATGCTG ATGAGCCTCG TATATTTGAT TACAACACCG AATATAAATC ATCAGAACAA
CTTTCAACTT ACTTTGCTGA AGATGCGTAT CGAGCATCAG ACCATGATCC TGTCATTGTT
GTGCTGAATC TACTCAGTGA AGCAGAACTT ATCGGTGATT TTGATGGCGA TGCAGACATA
GATCGCAATG ATGTGACTCA ATTTTCTATG ATGGTTCGCC GTGGTGAAAC AGGTGATATT
CAACATGACT TTAATAACGA TAGTGTCGTT AACAGTCTAG ATGTTAGAGC ATTAATGTCT
TTATGTACTC GTTCGCGTTG TGCGACAGAA TAA
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| Protein sequence | MKTRKVVPSL FFGKNKLKLN SIALCVASSF VSYSALSAET LWSEDFSDPA LTNKGAVYET
IDMDGVTRWS IDVTNAQLTA NSDWFKVTNN KVEARDVDGS VDWLSEKIDI QGKQNINISV
LAEESGTLES ADFFDLSYSI DDAPFVKVEN WQGKGSSSHT LIDDFTSAAI TQSIAEGSTL
QIKASMANNS GSEYIRLDNV LVTSGVEDGG GDSSQGPVTD ACYNCPDLST IESAEDFVDA
TYYAAVFNAI DSVQSTEVIR TNINEVISAN HKQLTYSEAW TALTVTDEDP MNPDNVILFY
RGISKAKNSN GSGSQSTNPD NWNREHVWAK SHGFPSSSAM AYSDIHHLRP TDISVNSSRG
NLDFDNSDAP LPEAPDNRVD GNSFEPRDAV KGDVARIVLY MDTRYAGLDS VTPDLQVVDT
LTSGGEAKLG KLCTLLAWSE EDPVDEFEIN RNNKIYEFQG NRNPFIDHPE WISTLYSASC
SEVDPVDPVD PVDPPATGVD LFFSEYVEGS SFNKAIEIYN PTNSAISLAD YQFKLYSNGS
LTATGTYTLT GEILANDVVV LGSSQIADDS LLVPFIDHFV SAVNFNGDDY VELVHGDTII
DNIGTYGVRE NWGKDTSLLR LSSITSGDTD RMDEFIKADQ WQSNPKDTFE NLGSHLADTS
PTDPGTGEDP VIGMCGDEAD KINVIQGSSN DSTVIGEVKV IEGSVTSAVP SLKGYFVQEE
ADDTDADLMT SEAIFVYFNN IANFPTEGNK IRILGTIKES FGRTQLTATT DFIDCGVGES
IEPTMVSLPV SSIDYWETIE GMSVSFNDTL KVSDTYNLAR YGQLTLSNGR LILPTNIYNA
GSEQAIDLAD KNSRNRITLD DMNNAQNPDN VPFPAPGLSH ENTLRLGDSV TGLTGVIDYS
FNQYRVLPTT TPLFSTTNVR TTQPDLNESG SLKVASFNVL NYFNGDGAGQ GFPTARGADT
LEEFTRQSSK IVSALKEINA DIVGLMELEN DGFDSNSAIA DLVKQLNSQV GEGTYNYVSL
DQTGVGGDAI AVGIIYKPAT VGIVGNAVTT NQSPFDFGNR QPLVQTFKEI ASNEELTIAV
NHFKSKGSCG SASGNNLDQG DGQGCWNELR TQAANGLTAW LNTKPTGTSD DDFLIIGDLN
AYGKEDPINA ITNSNYHNLV ADYMGSTGYS YSFGGEIGYL DHALASDKLA SQVVDTTVWH
INADEPRIFD YNTEYKSSEQ LSTYFAEDAY RASDHDPVIV VLNLLSEAEL IGDFDGDADI
DRNDVTQFSM MVRRGETGDI QHDFNNDSVV NSLDVRALMS LCTRSRCATE
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