Gene CPS_2634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2634 
Symbol 
ID3521530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2734836 
End bp2738768 
Gene Length3933 bp 
Protein Length1310 aa 
Translation table11 
GC content39% 
IMG OID637285088 
Productextracellular ribonuclease/nuclease fusion protein 
Protein accessionYP_269348 
Protein GI71281061 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG2356] Endonuclease I
[COG2374] Predicted extracellular nuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACTC GTAAGGTAGT GCCAAGTCTA TTTTTTGGCA AAAATAAATT AAAATTAAAC 
TCGATTGCAC TTTGTGTTGC TTCAAGCTTT GTTAGCTACA GTGCTTTAAG TGCTGAAACA
CTGTGGTCTG AAGACTTTTC TGACCCAGCA TTAACCAATA AAGGAGCAGT TTATGAAACC
ATCGATATGG ACGGTGTTAC TCGCTGGTCT ATTGATGTTA CTAATGCACA ATTAACAGCA
AACAGTGATT GGTTTAAAGT CACGAATAAT AAAGTCGAAG CAAGAGATGT AGATGGCAGT
GTAGATTGGC TATCGGAGAA AATTGATATT CAAGGCAAGC AGAATATTAA CATTTCTGTG
TTAGCAGAAG AAAGTGGCAC CCTTGAATCA GCTGATTTTT TTGATCTTTC CTATTCAATA
GATGATGCGC CTTTTGTTAA GGTAGAAAAC TGGCAAGGTA AAGGCAGCAG TAGTCACACA
TTGATTGATG ACTTTACGTC TGCAGCCATA ACACAAAGCA TTGCAGAAGG AAGTACGCTT
CAAATTAAAG CTTCTATGGC AAACAACTCT GGCTCTGAAT ATATTCGTTT GGATAACGTA
CTCGTTACTT CTGGTGTTGA AGATGGAGGA GGTGATAGTA GTCAAGGTCC AGTCACAGAT
GCTTGTTATA ATTGCCCAGA CTTAAGCACG ATAGAAAGTG CAGAAGACTT TGTTGATGCT
ACCTATTATG CCGCTGTGTT TAACGCCATT GATTCTGTAC AAAGTACCGA GGTTATTCGA
ACCAACATCA ATGAAGTCAT CTCAGCAAAT CATAAGCAGT TAACCTATTC AGAAGCATGG
ACAGCATTAA CTGTTACTGA TGAAGACCCG ATGAACCCTG ATAATGTTAT CTTATTTTAT
CGTGGTATTT CTAAAGCAAA AAATTCCAAT GGTAGTGGTT CACAATCGAC CAACCCTGAT
AACTGGAACC GTGAACATGT TTGGGCAAAA AGCCACGGCT TCCCAAGTTC AAGTGCTATG
GCTTATTCAG ATATTCACCA CTTAAGACCG ACGGATATAT CCGTTAACTC TTCAAGAGGT
AACTTAGATT TTGATAATAG TGATGCACCT TTACCAGAAG CTCCAGATAA TCGCGTAGAC
GGAAATTCAT TTGAACCAAG AGATGCTGTA AAAGGCGATG TTGCTCGTAT CGTTTTATAT
ATGGATACTC GTTATGCCGG ATTAGATTCT GTAACACCCG ACCTACAAGT TGTCGATACC
TTAACCTCTG GTGGTGAAGC CAAATTAGGT AAGTTATGTA CTTTGTTAGC GTGGAGTGAA
GAAGATCCGG TTGATGAGTT TGAAATTAAT CGAAATAATA AAATTTATGA GTTTCAAGGA
AATCGTAATC CATTTATTGA TCACCCAGAA TGGATTTCAA CGCTATATAG CGCATCATGT
TCAGAGGTTG ATCCGGTCGA CCCCGTTGAT CCAGTAGATC CTCCTGCAAC GGGAGTTGAT
TTGTTTTTCT CTGAATATGT TGAAGGTTCT AGCTTTAATA AAGCAATAGA GATTTATAAC
CCAACAAACA GTGCAATATC ATTGGCGGAT TATCAATTCA AGCTTTATTC AAATGGAAGT
CTTACCGCTA CTGGTACCTA TACATTAACG GGTGAGATAC TTGCTAATGA TGTGGTGGTA
CTTGGCTCTA GTCAAATTGC AGATGATAGT TTATTAGTAC CATTTATCGA CCATTTTGTA
AGTGCTGTTA ATTTTAATGG TGATGATTAT GTAGAGCTCG TACATGGCGA TACGATTATC
GATAATATTG GTACTTATGG TGTGAGAGAA AATTGGGGTA AAGATACTTC ATTACTACGT
TTATCTTCAA TAACATCAGG TGATACCGAC CGAATGGATG AATTTATTAA AGCAGATCAG
TGGCAGTCAA ATCCTAAAGA TACTTTTGAA AATTTGGGCT CACATCTCGC TGATACTTCT
CCGACAGATC CTGGTACAGG TGAAGATCCT GTTATTGGAA TGTGTGGTGA TGAAGCTGAC
AAAATTAATG TAATTCAAGG CAGTAGCAAT GACTCAACCG TTATTGGTGA AGTTAAAGTT
ATTGAAGGCT CTGTTACGTC AGCCGTGCCA AGCTTAAAAG GGTATTTTGT ACAAGAAGAA
GCAGACGATA CTGATGCTGA TTTGATGACC TCTGAAGCAA TATTTGTTTA CTTTAATAAC
ATTGCTAACT TCCCCACAGA GGGCAATAAA ATAAGAATAC TTGGTACCAT CAAAGAGAGT
TTTGGCCGTA CCCAATTGAC GGCGACAACA GACTTTATTG ATTGTGGTGT TGGTGAATCA
ATTGAGCCTA CAATGGTGTC TTTACCGGTT TCAAGTATCG ATTACTGGGA AACTATCGAA
GGCATGTCAG TGAGCTTTAA CGATACTTTG AAAGTTAGTG ATACTTATAA TCTGGCTCGT
TATGGTCAGC TAACGCTGTC TAATGGACGC TTGATATTGC CTACCAATAT TTATAACGCA
GGTAGCGAGC AAGCTATTGA TTTAGCGGAT AAAAACAGCC GAAATAGAAT CACATTAGAT
GATATGAACA ACGCGCAAAA CCCTGACAAT GTACCATTTC CAGCACCTGG ATTGAGTCAT
GAAAATACTT TACGTTTGGG CGATTCTGTT ACGGGTTTAA CTGGTGTCAT TGATTATAGT
TTCAATCAAT ATCGTGTGTT GCCAACAACG ACACCACTAT TTAGTACGAC AAATGTGAGA
ACAACACAAC CTGATCTCAA TGAAAGTGGC TCCTTAAAAG TAGCAAGCTT TAACGTTTTA
AATTACTTCA ATGGAGACGG TGCTGGTCAA GGTTTCCCTA CTGCGCGCGG TGCAGATACG
CTTGAAGAAT TTACCCGTCA AAGCAGTAAA ATTGTGTCTG CACTAAAAGA AATTAATGCA
GATATTGTTG GACTGATGGA GTTAGAAAAC GATGGTTTTG ACAGCAATTC TGCCATAGCA
GATCTTGTTA AACAGCTAAA TAGTCAAGTA GGAGAAGGGA CATATAACTA CGTTAGTCTC
GACCAAACAG GTGTTGGTGG CGATGCCATT GCAGTAGGAA TTATTTATAA ACCCGCTACT
GTCGGAATAG TGGGTAATGC TGTTACTACT AATCAAAGCC CATTTGATTT TGGTAACCGT
CAACCGCTGG TTCAAACCTT CAAAGAAATA GCGTCGAATG AAGAGCTAAC CATTGCGGTT
AATCACTTTA AGTCGAAAGG AAGTTGTGGC AGTGCCTCTG GCAATAATCT TGATCAAGGA
GACGGTCAAG GATGTTGGAA TGAGTTGAGA ACACAAGCAG CCAATGGCTT AACGGCTTGG
TTAAACACAA AACCTACGGG CACTAGCGAT GATGATTTCT TAATTATTGG TGATTTGAAT
GCTTACGGTA AAGAAGATCC AATTAATGCG ATTACCAACA GTAATTATCA TAATTTAGTT
GCTGACTATA TGGGAAGTAC TGGTTATTCG TATAGTTTTG GTGGTGAAAT TGGTTATTTA
GACCATGCCC TTGCAAGCGA TAAGTTAGCT AGTCAAGTAG TAGATACTAC CGTATGGCAT
ATCAATGCTG ATGAGCCTCG TATATTTGAT TACAACACCG AATATAAATC ATCAGAACAA
CTTTCAACTT ACTTTGCTGA AGATGCGTAT CGAGCATCAG ACCATGATCC TGTCATTGTT
GTGCTGAATC TACTCAGTGA AGCAGAACTT ATCGGTGATT TTGATGGCGA TGCAGACATA
GATCGCAATG ATGTGACTCA ATTTTCTATG ATGGTTCGCC GTGGTGAAAC AGGTGATATT
CAACATGACT TTAATAACGA TAGTGTCGTT AACAGTCTAG ATGTTAGAGC ATTAATGTCT
TTATGTACTC GTTCGCGTTG TGCGACAGAA TAA
 
Protein sequence
MKTRKVVPSL FFGKNKLKLN SIALCVASSF VSYSALSAET LWSEDFSDPA LTNKGAVYET 
IDMDGVTRWS IDVTNAQLTA NSDWFKVTNN KVEARDVDGS VDWLSEKIDI QGKQNINISV
LAEESGTLES ADFFDLSYSI DDAPFVKVEN WQGKGSSSHT LIDDFTSAAI TQSIAEGSTL
QIKASMANNS GSEYIRLDNV LVTSGVEDGG GDSSQGPVTD ACYNCPDLST IESAEDFVDA
TYYAAVFNAI DSVQSTEVIR TNINEVISAN HKQLTYSEAW TALTVTDEDP MNPDNVILFY
RGISKAKNSN GSGSQSTNPD NWNREHVWAK SHGFPSSSAM AYSDIHHLRP TDISVNSSRG
NLDFDNSDAP LPEAPDNRVD GNSFEPRDAV KGDVARIVLY MDTRYAGLDS VTPDLQVVDT
LTSGGEAKLG KLCTLLAWSE EDPVDEFEIN RNNKIYEFQG NRNPFIDHPE WISTLYSASC
SEVDPVDPVD PVDPPATGVD LFFSEYVEGS SFNKAIEIYN PTNSAISLAD YQFKLYSNGS
LTATGTYTLT GEILANDVVV LGSSQIADDS LLVPFIDHFV SAVNFNGDDY VELVHGDTII
DNIGTYGVRE NWGKDTSLLR LSSITSGDTD RMDEFIKADQ WQSNPKDTFE NLGSHLADTS
PTDPGTGEDP VIGMCGDEAD KINVIQGSSN DSTVIGEVKV IEGSVTSAVP SLKGYFVQEE
ADDTDADLMT SEAIFVYFNN IANFPTEGNK IRILGTIKES FGRTQLTATT DFIDCGVGES
IEPTMVSLPV SSIDYWETIE GMSVSFNDTL KVSDTYNLAR YGQLTLSNGR LILPTNIYNA
GSEQAIDLAD KNSRNRITLD DMNNAQNPDN VPFPAPGLSH ENTLRLGDSV TGLTGVIDYS
FNQYRVLPTT TPLFSTTNVR TTQPDLNESG SLKVASFNVL NYFNGDGAGQ GFPTARGADT
LEEFTRQSSK IVSALKEINA DIVGLMELEN DGFDSNSAIA DLVKQLNSQV GEGTYNYVSL
DQTGVGGDAI AVGIIYKPAT VGIVGNAVTT NQSPFDFGNR QPLVQTFKEI ASNEELTIAV
NHFKSKGSCG SASGNNLDQG DGQGCWNELR TQAANGLTAW LNTKPTGTSD DDFLIIGDLN
AYGKEDPINA ITNSNYHNLV ADYMGSTGYS YSFGGEIGYL DHALASDKLA SQVVDTTVWH
INADEPRIFD YNTEYKSSEQ LSTYFAEDAY RASDHDPVIV VLNLLSEAEL IGDFDGDADI
DRNDVTQFSM MVRRGETGDI QHDFNNDSVV NSLDVRALMS LCTRSRCATE