Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2568 |
Symbol | |
ID | 3522851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2673890 |
End bp | 2674411 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637285022 |
Product | hypothetical protein |
Protein accession | YP_269283 |
Protein GI | 71282377 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.192272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACCCGT ATATTAAGTT AATCGCGACC CTGTTTAGAG CCAAAAATAG TCCTCAAATG AATTTGGATG AAAAAAGCGT GCTGAACTGC CGTGCAGGGT TAACTGATAT TGATGTCTTT GTTGAACTTA ATAATGCGCG TCATTTAACG TATATGGAGT TTGGTCGTTG GGATTTTGCT CAACGTACCG GTTTACTGAG TCTCATGAGA AAAAACAAAT GGGCCTTCGC TGTGGGCGGT GCTAGTGTGC GCTATCGTAG AAGAATAGCG TTTTGGAAAA AATTCACTGT CACTACTCAG GTTATTTGTC ATGATGGCCG CTGGTTTTAC TTTTTACAAG AAACCCATAT TAAAGATAAA GTTTGTTCAT CGGCATTAAT TAAAGCCGCG TTTACCTCAA AGCAGGGTTT AGTACCCGCT ACTGAAGTTT TAGCTGCCTA TGGTAAAACC ACACCAAACT TTGATGTACC CGATTGGGTT AATGCCTGGA TTGATGCAGA AAGTCAGCGA CCTTGGCCGT AA
|
Protein sequence | MYPYIKLIAT LFRAKNSPQM NLDEKSVLNC RAGLTDIDVF VELNNARHLT YMEFGRWDFA QRTGLLSLMR KNKWAFAVGG ASVRYRRRIA FWKKFTVTTQ VICHDGRWFY FLQETHIKDK VCSSALIKAA FTSKQGLVPA TEVLAAYGKT TPNFDVPDWV NAWIDAESQR PWP
|
| |