| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2560 |
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| Symbol | |
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| ID | 3521458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2662945 |
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| End bp | 2663979 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637285014 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_269275 |
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| Protein GI | 71280989 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.480763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAA CGACACTGTC CACTATTCCT CGCCTCATCG GCCAAGTACT GTCTATTTAT
GATGTAGCTC CTGAGGCAAT TTTCTCAGCG GCTAACATTG ATATTACGAG TGATGCTCAA
ACTCGAGTGC CTATGGAGAA CATGGCAACG TTATGGAAAC TGGCAGTAGA AGCAACCCAT
AATAATGAAC TTGGTTTAGT TGCAGCCTCT TTATTCCAAC CGGTTTACTT GAAAAGCATT
GGGTTGGCAT GGCTTGCCAG TGAGAATTTA GAAGAGGGAT TAAAACGTTA TATTGCCAGT
AGTCAGTTGA TTAATACCGA AATGCAGATT GAATTAACAG AGCGTGATGG CATAGATGGT
GAAGAAACAT TAATTCAATA TCAGCGTCGA TTAACTTCCA GTAATACAAT TAAGGTCCAC
CCCTGCGCTA TTGAACTGGG TATAGGGTTT TTCTTAAAAA TGTTCCGATT AGCCGCAGGT
AAAAATATAC CCGCTACTGG GGTATATTTT ACTTTTGCTA TCGAAGAAAA CAACAAAGTC
TATGAAGAGT ATTTCCAATG CCCTGTATAT GGCAATCAAG CAGTAAATGG CATCGCCTTT
TCTAAAGCGT TACTCACTGA GACACTACCT ACACATGATG TAGAGTTAGT TGAAATGAAC
GAAGTGGTTA TTAATAAACA CCTAGATTCA ATGGATAATG GCGAAACAAG TAGTAAAGTT
ATTAAAATGA TTAATGATTT ATTACCTTTA GGATGCCCAA CAGAAGAAGT CATTGCCTAT
AAACTACATA TGAGTAAACG GACGTTGCAA AGAAAACTGA GTGTTGAAAA ACAATCTTTT
TTAGCCTTGC TAACCTCTGT TCGCCTAATG TTAGCTAAAG AAAAACTAGC GAATAAGAGG
GTTTCAGTCA CCGAAATCAC CTATCAACTA GGTTACAGCT CACCCAGTAC ATTTGCCCGT
GCTTTTAAAA AGCATACCCA ACTTTCTCCC CTTGAATATC GTAATCAAGT ATCAAGCTAC
TCAAGCTGTT CCTAG
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| Protein sequence | MSQTTLSTIP RLIGQVLSIY DVAPEAIFSA ANIDITSDAQ TRVPMENMAT LWKLAVEATH
NNELGLVAAS LFQPVYLKSI GLAWLASENL EEGLKRYIAS SQLINTEMQI ELTERDGIDG
EETLIQYQRR LTSSNTIKVH PCAIELGIGF FLKMFRLAAG KNIPATGVYF TFAIEENNKV
YEEYFQCPVY GNQAVNGIAF SKALLTETLP THDVELVEMN EVVINKHLDS MDNGETSSKV
IKMINDLLPL GCPTEEVIAY KLHMSKRTLQ RKLSVEKQSF LALLTSVRLM LAKEKLANKR
VSVTEITYQL GYSSPSTFAR AFKKHTQLSP LEYRNQVSSY SSCS
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