| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2520 |
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| Symbol | |
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| ID | 3521294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2624065 |
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| End bp | 2624664 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284975 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_269236 |
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| Protein GI | 71280825 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0216463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTT TATTAGTAGG TGCTAGCGGC ACTATAGGAC AAGCAGTTGA AGCAAACCTT
AAAGCTAACC ATGAAGTCAT TTCAGCAAAT TATGCTAACG GTGATGTAAA AGTTGATTTA
GGTAGCCCAG AATCAATCCG CAACATGTTT GAAGTAGTTG GTCATGTAGA TGCAGTGATT
TCTACTGCAG GGGTAGCGGC TTTTGCAGGT TTTGATGACT TAACTGACAT CGATTATCAA
ACGGCACTAA ATAACAAATT GATGGGACAG ATAAACTTAC TACGTTTAGG AAAGAGTTTT
ATAAACGAAG GCGGTTCAAT CACCTTAACA TCAGGTGTTT TATCAAGAGA GCCTATGCAT
GGTAGTGCGG TAATAAGTAT GGCTAACGGT GCATTAGAGA GTTTTGTTAA AGCAGCAGCT
TTAGAAGTCG ATAACTTTAG AGTAAATGTT GTTGCCCCAG TATTTGTTAA AGAAACAATG
GCAATGATGG GTATGGATAC GGAATCAGGT TTATCTGCTA ACGATACTGC TAAAGCGTAC
ATGGCAGCAG TTACAGGTAA AATGCATGGA CAGACGCTAG ATGCGCCAGA TTACTTATAA
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| Protein sequence | MKILLVGASG TIGQAVEANL KANHEVISAN YANGDVKVDL GSPESIRNMF EVVGHVDAVI
STAGVAAFAG FDDLTDIDYQ TALNNKLMGQ INLLRLGKSF INEGGSITLT SGVLSREPMH
GSAVISMANG ALESFVKAAA LEVDNFRVNV VAPVFVKETM AMMGMDTESG LSANDTAKAY
MAAVTGKMHG QTLDAPDYL
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