Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2510 |
Symbol | |
ID | 3523109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2618366 |
End bp | 2618911 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637284965 |
Product | TetR family transcriptional regulator |
Protein accession | YP_269226 |
Protein GI | 71282634 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.225069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGA AACGTGAACT TTTGGTAAGT ACTTCACTAG CGCTTTTTTA CGACAATGGC GTAAACTCTA TTGGTATCAA TGAAATATTG AAAATTTCAG GTGTGGCCAA AAGAACGCTT TACAGCCATT TTGAAAGTAA AAATACGTTA GTTTTAGCCG CTTTAAGGCA AAGGCATGAA ACGTTTATCA CATGGTTAAA AGAGCAATTG TCAGACACTC AGTCTGATCA AGAGGTTATT GAGCAACTAT TTAATGCGCT TGGGAACTGG TTCGATAACA AAGAGCCAAA GCTCGGTAAT TTTAGAGGAT GCTTCTTTAT TAACACTGCG GCAGAATTTA GTGATAAGGG CAGTGATATT TCTCGCTATT GCAGTGAGCA CAAAGAAGAA GTAAGACAAT TAATACAAAA GAAGTTAACT TCAGATCACC CTCTCCTACT CGATGCTATA TGCATTATGA AAGAAGGTGC CATTACTACA GCTTATGTAA CAGGTAAAGG ATCCGACGTT ACCTCAAAAT GCATCAAAGT ATTGTCTGCG CTGTAA
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Protein sequence | MNKKRELLVS TSLALFYDNG VNSIGINEIL KISGVAKRTL YSHFESKNTL VLAALRQRHE TFITWLKEQL SDTQSDQEVI EQLFNALGNW FDNKEPKLGN FRGCFFINTA AEFSDKGSDI SRYCSEHKEE VRQLIQKKLT SDHPLLLDAI CIMKEGAITT AYVTGKGSDV TSKCIKVLSA L
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