| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2472 |
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| Symbol | |
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| ID | 3518448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2586764 |
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| End bp | 2587840 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637284927 |
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| Product | porin |
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| Protein accession | YP_269188 |
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| Protein GI | 71279008 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0827968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACA CAAGATTAAA GTCAGTATTA CTTCCTTTAG CGTTAGCGTT ACCTATTTTC
GCCGCACAAG CTGCTGAAGA TGTGACTGAA GCTGAATTAC AACGCCAGTT TAATGAAATT
AAAACACGCT TAGCGCAGCT AGAACAAGGC AAAGTAGTCA CAGCAGAGCA AGAATCAAAT
ACAAAAATGA GTTTCTATGG CACGTTGCGC CCTACTTTTG GTGTAACTAG TACTGATGAC
AACGATAGCT GGGATGTAGG CGACGCACTG TCACGTATAG GTTTTACTGC TGAGCATAAA
TTGAGTAATG GCATGATTGG CTTTACCAGA GGTGAATTTA AAGTCCAAAT CCAAGGCGAT
GCTCACTTCG GTGACGCCCG CAAAGCTTAT GTTGGTATAA AAGGTGACTT TGGACGAGTT
GCTATTGGTA AACAAGACAC TACTAGTTAT GCAGTAATGG GAGTGGTTGA TATATTTAAC
CGTACTAATA CACCCTTAGC TTATGATGAT GTCGGTGTAT TCCGTAAGCA GGAATTAGTT
TCTTATCGTA AATCTTTTGG TAACTTGCAA GTACGAGGTG AAGCACAATT CTCTGGTGAA
AACGATGATA TAGATGGCAG CGAACTATTC AATGCTGGTG CAATTTATAC AGGCAGTGAT
TATACGCTTG GTTTTGCTTA TCTAACCAGA GACTTTACAG GTGCCGATGA AAATAGCATT
GCTGTAACAG CGTCTAAAAG TATTGGCGAT TGGTATTTTG CCGCCGCTTA TGGTGGTTTT
TCACGCGATG TAGTGGATGG CGATATTACG ACAATAGATG TCGTAGCGAC CTATGCAATC
AATAGCGAAT ATAAGTTATT GTTTGGCGCA TCACAATTTG ATGATGAGCA AGCTGAAGTC
AATTCAAAAG ATGTTGCACG CTTTAATACA ACGCTTGAAT GGCAAGGCAG CAAAGATTTC
CGCTTATTTA TTGAATACCA GCATAACGAA TATGACAATG ACGACGTTAA CCTAGCCGTT
AGCGATAGCG ACCAGCTAAC CGTTGGAATG CGTTACAACT TCGATGTTAA GTTTTAA
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| Protein sequence | MKHTRLKSVL LPLALALPIF AAQAAEDVTE AELQRQFNEI KTRLAQLEQG KVVTAEQESN
TKMSFYGTLR PTFGVTSTDD NDSWDVGDAL SRIGFTAEHK LSNGMIGFTR GEFKVQIQGD
AHFGDARKAY VGIKGDFGRV AIGKQDTTSY AVMGVVDIFN RTNTPLAYDD VGVFRKQELV
SYRKSFGNLQ VRGEAQFSGE NDDIDGSELF NAGAIYTGSD YTLGFAYLTR DFTGADENSI
AVTASKSIGD WYFAAAYGGF SRDVVDGDIT TIDVVATYAI NSEYKLLFGA SQFDDEQAEV
NSKDVARFNT TLEWQGSKDF RLFIEYQHNE YDNDDVNLAV SDSDQLTVGM RYNFDVKF
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