Gene CPS_2365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2365 
SymbolxarB 
ID3523094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2461156 
End bp2463435 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content37% 
IMG OID637284822 
Productxylosidase/arabinosidase 
Protein accessionYP_269083 
Protein GI71282619 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.327511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAAA AGCCATTTTT ATTGCTAGCT TCACTTACAC TAATTAGCCA AAGTCTGCTA 
GCAACCCCTA TAAAACGTTC CGATCAGGAT ATCGACAAGG AAGTCTCCCA TCTGCTTTCA
AAAATGACTA TTGAAGAAAA AGTAGGCCAA ATGACCCAAA TTACTTTAGC GGTAATTTTA
GATAAAGGTA GCCGTGAAAC AGGTGATGGT TTAGTTATTG ATAAAGAGAA ACTTAAAAAA
GCTATTCATA CCTACAAAGT AGGATCAATT TTGAACTCAA CAGCCACAGC ATTAACGGTA
AAGCAATGGA ATCGATTGAT TAAAGAAATT CAAGATGAGG CACTGCAGAC TCCTAATGAA
ATACCAGTAA TTTATGGCGT TGATGCAATT CACGGTGTTA CTTACACTAA AGGCTCAACC
CTTTATCCTC ATAACATTGG GCTAGCCGCT ACTCGTAATC TTAAACTGGC TAAAGCTACC
GCTAAAGCGA CAGGTAAAGA ACTACGTGCC ACAGGCGTTC GTTGGAATTT TGATCCAGTA
CTTGATTTAG GTGTTAATCC AATTTGGTCT CGTTTTTCTG AAACCTATGG TGAAGATACT
TACCTAACGA CTCAAATGGG TGTTGGTGTA ATTCAGGCAT ATGAAGAAGA TGGGCTTGAA
AATACCACCG CAGTCGCTTC TACCATGAAA CACTTTATTG GTTATTCTGA TCCCGCTAAT
GGCAAAGATA GAACACCTGC TTATATTCCT GATATTGTTT TGTGGGAAAA ATATTTACCT
CAATTTAAAG CCGCTGTTAA TGCAGGCTCA TCATCAATAA TGATCAATTC AGCCTCAGTA
AATGGTATTC CTGTTCACGG CAGCAAGCGT CTATTAACAG ATCTTCTGAG AGGCGAGCTT
GGCTTTAAAG GCTTAGTGGT TACAGACTGG GAAGATGTTA TTCGTTTGCA TACTCGCCAC
ATGGTCGCTG AATCACCACG CGAAGCAGTT AAACAAGCTG TTGATGCGGG TATTGATATG
AGTATGGTGC CAAAAGATTT TTCATTCTAT GAGCTATTAG TCGATTTAGT AAAATCTGGT
GATATATCAG AAGAACGTAT TGATAAGTCT GTAAGTATTA TTTTAAAGCT TAAATATCAA
TTAGGTTTAT TTGATAACGC CTACCACGAA TCTGAGGCAG CCCAAAACTT TGGTAAAGCT
GAGTATAAAA ACTTAGCACT AAAAGCGGCA CGTGAATCTA TTACGTTATT AAAGAATGAC
AATGATATTT TACCTTTACC TAAAAACGCT AAAATATTAT TAGCCGGCCC TACAGGAAAT
TCTCATGCGC CATTAAATGG TAGCTGGTCA TACTCATGGC AAGGTGATGT TGAGGCTAAC
TATCCCGAAA ATGAAAAAAC TATTTTAGAT GCTTTTCAAA GAGCTGTTGG TAAAAAGAAC
TTAATCACTC ACACCTACGC TGGTTTTAAT AACGAGAAAA ATTATGACGT TAATGGTTTA
ATTAAAAAAG CGAAAAAAGC AGATTACATT GTACTTGCCT TAGGTGAAAA CGCCTATGCT
GAATCTCCAG GTGCACTTGA TGACTTAAAC CTAGCAAAAA ATCAGATGGC TTTAGCACAA
GCAGCTTTAT CAACAGGTAA ACCCGTCATA GTTGTTTTAG CCGAAGGGCG TCCACGTATT
ATCAAAGACA TTGTTGGCGC CACAAAAGCA ATAGTGCAAG CTTATATACC GGGTAGTCAA
GGCGCACAAG CTATTAGCGA CGTTATTTTT GGTGATTATA ATCCTAATGG TAAATTACCT
TACAGTTACC CACAGTTTAC TGGTGATTTT GCTAATTACG ACCGTGTTTA TTTAAGTGAT
ATTCAACAAT TAACCCCTGG TGACATGAGT TATAACGGTT ACAAACCACA ATGGCCATTT
GGGCATGGTT TAAGTTATAC CAACTTTGCT TATTCAAATA TTAAATTGAG CAGTAAAACG
CTGAAAGGTG ACAATAAACT TAATATTTCG GTAAAGGTTA CCAACACAGG AAAATTTGAA
GGCAAAGAAT CAGTAGAACT TTATGTTAGC GATTTATTCG CCTCTGTTAG CCCAGCAGTT
AAACGTTTAA AAGCCTTTAA AAAAATCAAC TTAAAAGCAG GACAGAGCAA AAAAGTTAAC
TTTACTATCA GTAAAGATGA CTTAACTTTT GTTAACCCTG AGCTAAAGCG TATTGTTGAA
GCGGGCGAGT TTACCCTTGC TATTGGCAGT GAAAAAATAA ACTTTCACTA TCAATTTTAA
 
Protein sequence
MLKKPFLLLA SLTLISQSLL ATPIKRSDQD IDKEVSHLLS KMTIEEKVGQ MTQITLAVIL 
DKGSRETGDG LVIDKEKLKK AIHTYKVGSI LNSTATALTV KQWNRLIKEI QDEALQTPNE
IPVIYGVDAI HGVTYTKGST LYPHNIGLAA TRNLKLAKAT AKATGKELRA TGVRWNFDPV
LDLGVNPIWS RFSETYGEDT YLTTQMGVGV IQAYEEDGLE NTTAVASTMK HFIGYSDPAN
GKDRTPAYIP DIVLWEKYLP QFKAAVNAGS SSIMINSASV NGIPVHGSKR LLTDLLRGEL
GFKGLVVTDW EDVIRLHTRH MVAESPREAV KQAVDAGIDM SMVPKDFSFY ELLVDLVKSG
DISEERIDKS VSIILKLKYQ LGLFDNAYHE SEAAQNFGKA EYKNLALKAA RESITLLKND
NDILPLPKNA KILLAGPTGN SHAPLNGSWS YSWQGDVEAN YPENEKTILD AFQRAVGKKN
LITHTYAGFN NEKNYDVNGL IKKAKKADYI VLALGENAYA ESPGALDDLN LAKNQMALAQ
AALSTGKPVI VVLAEGRPRI IKDIVGATKA IVQAYIPGSQ GAQAISDVIF GDYNPNGKLP
YSYPQFTGDF ANYDRVYLSD IQQLTPGDMS YNGYKPQWPF GHGLSYTNFA YSNIKLSSKT
LKGDNKLNIS VKVTNTGKFE GKESVELYVS DLFASVSPAV KRLKAFKKIN LKAGQSKKVN
FTISKDDLTF VNPELKRIVE AGEFTLAIGS EKINFHYQF