Gene CPS_2237 details

Gene Information

• Locus tag: CPS_2237
• ID: 3521332
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 2337258
• End bp: 2339261
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637284694
• Product: collagenase
• Protein accession: YP_268962
• Protein GI: 71280863

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.971967
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAC TAACAATACT TCTTCTGACT CTCGCTATAT CTGTTGTAAT TACTGCGTGT 
AGTGTTAACG ATGAGGCTGA TACTACTAAG GTCATGCAGT CTGTCTTAGT ACCAATAGTA 
AATCCAATGG TTGCTCAAGT ATTAGCGACT GATATAGAGC AGTTATGGAG CCAAGATTTT 
AATCATTATC AACAGGGATT ACTAAAAGCT GTTGCGGATG AAATATCAAT GGAAGCTTTA 
AAAGGAGACT TAACTAATGA TAAATTAGAG AAGCTTACTT TTTATCTTAG AATTTACAGT 
AGCTTTGGTG CAGATAAATA TTGGACCGAA GAAACCGCAA TATCTGTTAA TAGCGCATTA 
GACAATTTAT ATAATATGCC TGGTTTTTTT GAGGTGAGTC AGACTACAGC ACGCTTGCAT 
GAAAATTACG CTGTTGCTTT GTATCGTTTA TATTTTTTAG CACCTTTACA ACCATTTATA 
GTAGAGCAGG TAAAGCCGTT AAGTCAGTTA ATTAACCTGT ATGCTTCCGC TGATCTTTCT 
AATACAACTA CAGTGAACTC TGATAAAGAC ACAGCGATAG ATTATGCACT GTGGGAAGTA 
TTACGTGCTG GCGCTATTTT ACCCTACGAA GCCCGAAGAA AAAATACTGC TGAATTCATG 
AAAGGTGTAC ATGGTGAAGG TGAACTTCAA CAGGCATTAA TTCAATTTAT CACTGCTAAA 
AATAGTACTT TAGTGGGGGA TGACTGGCCT AAGCAACACG CTCTTTGGGC ATTGGCACAG 
TATTATAATT TATATACGAA AGAATATTGG AATGACTACT ATGAGCACTC AGCTGAGGAT 
CAGAAACGTT TAGATGACGA TAAATTAACC CTCAAGATTG AAGGTGAAAT GGATACGCTT 
GATAACAGTG TATGGGCGGC GTTAACCAAT GATAAAGCAA CATCAGTAGA GCAAAATAAG 
ACACTTTTTA GTGTGCCTTA TGTCGTCAAC ACTTTTCGTG GAAAGTCTGA ATGTGAAGAG 
GGTACGCTAG TCGATCGCTG CATTTCCCCA TCAATTGAAC AAGCATTGCC TATTAACCAT 
GAGTGCTCAA GTAAAATATA TATTTTAGCC CAAGCCATGT CTTCAGCACA GTTAAGTGAT 
GCTTGTCAGC AGTTAATCGC TCAAGAAAGT AATTTCCATG AAATATTAGC GACTAATAAT 
CAGCCCGTTG CCAACGATTT TAACGATAAA TTACGAGTCG TTATTTTTGA TAATCACGCA 
GAGTATAATA AATTCGGCCA GCTAATTTTT GATATTAATA CCGATAATGG TGGTATGTAC 
ATTGAGGGAA CGACACAAGA TCCTAACAAT ATTGCGACTT TTTACTCATT TGAACATTTC 
TGGGTACGAC CTGAATTTGC TGTTTGGAAT TTAAACCATG AGTTTGTTCA TTATTTAGAT 
GGACGCTTTG TTAAATACGA TACTTTTAAT CATTTTCCAA GTCATATGGT GTGGTGGTCT 
GAAGGACTCG CTGAATATGT TGCCAAGGAA GATAATAATC CAAAAACTTT CAAATTAGTC 
AATGACACAA CTCCAGAAGA CTGGCCCAGT TTAACGGATA TTTTTAATAC TGAATATAAA 
GACGGTACTG ATAGGGTATA TCGGTGGGGC TATTTAGCTG TGCGCTTTAT GAATGAAAAA 
CATCAAAATG AATACAGGAA AATGGCGCAC TACTTAAAAA CAGACTTTTT TGATGGTTAT 
AAAAAATTAG TTGAGGAGTC AGGTAAAAAG TATGCAGCAG AGTTTACTCA ATGGTTAGAT 
GAACATAATG CTAACTATGT GGCGGAAGAA GATGTAAATA ACCCACATAA ACCACGTCAA 
TTCTATCGTT ATACGTATAA AGATTACTTA CAGCCAAGTC ATTTAACGGA AGATAAGCTG 
CATATGCACT GGCAGTATTG GCATGAAAAT GCTTTAAAAT CATTAGATAA AAAATTGGCT 
AATAAAAATA CTGTGACTAA ATAG 

 

Protein sequence

MNKLTILLLT LAISVVITAC SVNDEADTTK VMQSVLVPIV NPMVAQVLAT DIEQLWSQDF 
NHYQQGLLKA VADEISMEAL KGDLTNDKLE KLTFYLRIYS SFGADKYWTE ETAISVNSAL 
DNLYNMPGFF EVSQTTARLH ENYAVALYRL YFLAPLQPFI VEQVKPLSQL INLYASADLS 
NTTTVNSDKD TAIDYALWEV LRAGAILPYE ARRKNTAEFM KGVHGEGELQ QALIQFITAK 
NSTLVGDDWP KQHALWALAQ YYNLYTKEYW NDYYEHSAED QKRLDDDKLT LKIEGEMDTL 
DNSVWAALTN DKATSVEQNK TLFSVPYVVN TFRGKSECEE GTLVDRCISP SIEQALPINH 
ECSSKIYILA QAMSSAQLSD ACQQLIAQES NFHEILATNN QPVANDFNDK LRVVIFDNHA 
EYNKFGQLIF DINTDNGGMY IEGTTQDPNN IATFYSFEHF WVRPEFAVWN LNHEFVHYLD 
GRFVKYDTFN HFPSHMVWWS EGLAEYVAKE DNNPKTFKLV NDTTPEDWPS LTDIFNTEYK 
DGTDRVYRWG YLAVRFMNEK HQNEYRKMAH YLKTDFFDGY KKLVEESGKK YAAEFTQWLD 
EHNANYVAEE DVNNPHKPRQ FYRYTYKDYL QPSHLTEDKL HMHWQYWHEN ALKSLDKKLA 
NKNTVTK