Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2231 |
Symbol | |
ID | 3520824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2331855 |
End bp | 2332679 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637284688 |
Product | hypothetical protein |
Protein accession | YP_268956 |
Protein GI | 71280358 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGATTAC TGTTATGCCT TTGTTCTTTG CTTCTCAGCA GTTACAGCAG TAAATTGTTC GCCTTATCGG CAGACCATGC TGTACTCTCA AGTGTTCAAT CTCAAAACAA ATCAGTTATT CAATTAGCGA CAAAACCTAA AAATAATCCC CTCAAATCGT CTTCAGATAA AACCTATGAT TTTGCTTCTA TTGAGTTATT GATAGAGCAA GAAGTAGGGC GAATTGTACT CAAACAAATC TATAAAAATA TTGGCATTAA CATTACGATC AGTCCTTTAC CGGGTAATCG GGCACAGCAT TTTGCCAATA CAGGTATTAA TGATGGTGAG ATCATGCGTA TTTGGACTTA TGGAGATGAA AACCCCAATA CAATCAGAGT ACCCACGCCG TACTATTACT TAGAAACGAT GCCGTTTGTT TTGAAAAGTT CTAAAATTTC TATCCTATTA AAGGAAGATT TAGCTAAGTA TCGTTTAACT AAAATACGCG GTGTAAAACA TACCAATAAT ATTACCAAAG GGCTTACTAA TATTTACGAG ATGAGCTCTA CAGACGATAT GTTTAAACTA TTGCTGAGTG GAAAGGTTGA TGTGTTGTTA ACGAATACTC TCGATGGAAA TCTAGCACTT GAAAGGCTTG GCTTAAGAAA TGTCGCGAGC ATGGAAAAGC CATTAGTACG TTTATCTTTA TATCACTATA TTCATAAAGA TAACAAAGTA TTGGTCCCTA TTGTCGATAA AGAAATCCAA CGGATGAAAA GTAATGGTGA GTTAGCCACT CTCATCCTAC AAGCTGAAAA AAGCGTTTTT CAGCTTAATC AGTAA
|
Protein sequence | MRLLLCLCSL LLSSYSSKLF ALSADHAVLS SVQSQNKSVI QLATKPKNNP LKSSSDKTYD FASIELLIEQ EVGRIVLKQI YKNIGINITI SPLPGNRAQH FANTGINDGE IMRIWTYGDE NPNTIRVPTP YYYLETMPFV LKSSKISILL KEDLAKYRLT KIRGVKHTNN ITKGLTNIYE MSSTDDMFKL LLSGKVDVLL TNTLDGNLAL ERLGLRNVAS MEKPLVRLSL YHYIHKDNKV LVPIVDKEIQ RMKSNGELAT LILQAEKSVF QLNQ
|
| |