Gene CPS_2231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2231 
Symbol 
ID3520824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2331855 
End bp2332679 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content36% 
IMG OID637284688 
Producthypothetical protein 
Protein accessionYP_268956 
Protein GI71280358 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGATTAC TGTTATGCCT TTGTTCTTTG CTTCTCAGCA GTTACAGCAG TAAATTGTTC 
GCCTTATCGG CAGACCATGC TGTACTCTCA AGTGTTCAAT CTCAAAACAA ATCAGTTATT
CAATTAGCGA CAAAACCTAA AAATAATCCC CTCAAATCGT CTTCAGATAA AACCTATGAT
TTTGCTTCTA TTGAGTTATT GATAGAGCAA GAAGTAGGGC GAATTGTACT CAAACAAATC
TATAAAAATA TTGGCATTAA CATTACGATC AGTCCTTTAC CGGGTAATCG GGCACAGCAT
TTTGCCAATA CAGGTATTAA TGATGGTGAG ATCATGCGTA TTTGGACTTA TGGAGATGAA
AACCCCAATA CAATCAGAGT ACCCACGCCG TACTATTACT TAGAAACGAT GCCGTTTGTT
TTGAAAAGTT CTAAAATTTC TATCCTATTA AAGGAAGATT TAGCTAAGTA TCGTTTAACT
AAAATACGCG GTGTAAAACA TACCAATAAT ATTACCAAAG GGCTTACTAA TATTTACGAG
ATGAGCTCTA CAGACGATAT GTTTAAACTA TTGCTGAGTG GAAAGGTTGA TGTGTTGTTA
ACGAATACTC TCGATGGAAA TCTAGCACTT GAAAGGCTTG GCTTAAGAAA TGTCGCGAGC
ATGGAAAAGC CATTAGTACG TTTATCTTTA TATCACTATA TTCATAAAGA TAACAAAGTA
TTGGTCCCTA TTGTCGATAA AGAAATCCAA CGGATGAAAA GTAATGGTGA GTTAGCCACT
CTCATCCTAC AAGCTGAAAA AAGCGTTTTT CAGCTTAATC AGTAA
 
Protein sequence
MRLLLCLCSL LLSSYSSKLF ALSADHAVLS SVQSQNKSVI QLATKPKNNP LKSSSDKTYD 
FASIELLIEQ EVGRIVLKQI YKNIGINITI SPLPGNRAQH FANTGINDGE IMRIWTYGDE
NPNTIRVPTP YYYLETMPFV LKSSKISILL KEDLAKYRLT KIRGVKHTNN ITKGLTNIYE
MSSTDDMFKL LLSGKVDVLL TNTLDGNLAL ERLGLRNVAS MEKPLVRLSL YHYIHKDNKV
LVPIVDKEIQ RMKSNGELAT LILQAEKSVF QLNQ