| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2208 |
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| Symbol | |
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| ID | 3519495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2308247 |
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| End bp | 2309110 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637284665 |
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| Product | lipoprotein NlpI |
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| Protein accession | YP_268933 |
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| Protein GI | 71278186 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.078533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACACAAG GCTGTGCTTC AAGTCAGGGG GAGAATAACA ATAATATTTC TTCATCAATA
ATGAATAATA TTGTAATTGC TGAACCCCTT AGTATTAACT ATAAGAGTGA AATCGCGATT
GCACGTTTAA CTGAAGTGAT AAATAGAGCG AAAATATCTG ACGTTCAAAG AGCACAGTTA
TTTTATGACC GTGGTGTTTT ATACGACAGT GTTGGTTTAC GATCATTAGC AAGATTTGAC
TTTTCTCATG CATTGCAATT AAAACCCGAC TTAATTGATG CTTATAATTT TTTAGGTATT
CATTACACAC AATTGCAAGA GTTTGCTCAA GCCTATGAGA AATTTGATTC GGCATTAGAT
CTAGCACCTG ATCATGAGTA TGCGTATCTT AATAGAGGTA TAGCGCTTTA TTATGGCTCT
AGACCTGAAC TTGCCAGTAT TGACTTTAAA GCCTTTCATC AAAAGCAGCA AGATGATCCA
TACCGCTTGT TGTGGTTGTA TTTAACTGAG TATGAGGTAG ATCCACTTGC GGCAAAATAC
TCGTTGAAAC AACGTTCAGA ATTAGTTGAT GAACGTACTT GGGCTAAACA GGTTGTTTAC
CTGTATCTAG GCGAAATTTC ACAAGGAGAT TTTGTTAAAA ACTTAACAAA AGATATAAGA
TCAAATAAAG AGCTGACCGA ACGTTTATGC GAGGCCTATT TCTATTTAGG TAAATATAAC
CAAACCTTAG GTTATCGTGG AAGTGCAGCT AATTACTTTA AGCTGGCATT AAGTACTAAT
GTTTACGAAT TTGTTGAGCA TAGATACGCG AAGCTTGAAC TAGATTTAAT GCGCACTAAA
AAAGTCGCTG AAAGTCAGCC TTAA
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| Protein sequence | MTQGCASSQG ENNNNISSSI MNNIVIAEPL SINYKSEIAI ARLTEVINRA KISDVQRAQL
FYDRGVLYDS VGLRSLARFD FSHALQLKPD LIDAYNFLGI HYTQLQEFAQ AYEKFDSALD
LAPDHEYAYL NRGIALYYGS RPELASIDFK AFHQKQQDDP YRLLWLYLTE YEVDPLAAKY
SLKQRSELVD ERTWAKQVVY LYLGEISQGD FVKNLTKDIR SNKELTERLC EAYFYLGKYN
QTLGYRGSAA NYFKLALSTN VYEFVEHRYA KLELDLMRTK KVAESQP
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