Gene CPS_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2105 
Symbol 
ID3518815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2189645 
End bp2190409 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content33% 
IMG OID637284564 
Productglycosyl transferase, group 2 family protein 
Protein accessionYP_268832 
Protein GI71278559 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0121105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAA ATGAACCTTC TGTATCTATT ATCATGGCAA CATATAATTC AGAAAAGTTT 
CTTCGGGAAA CCTTAGACTC TATTTGCTGT CAAACATACG GTAATTGGGA GTTAATAATA
ACGGATGATT CATCTACCGA TAATACAAGT GATATTTTAA GAGATTATTC TGAAAGGTAT
AATAATATTT TTTACAGTAT TAATGAAGTT AATCAAGGAG CGGCTATTAG CCGTAATAAA
TGTATTTCAC AAGCTAAGGG GATGTATATT GCTTTTATTG ACTCTGATGA TCTTTGGGCA
CACAACAAGT TAGAAAAGCA CATACACTTC ATTGCGGAGC ATAACAGTGC AATTTCATTT
ACTTCTTATG AGCTTATGAA CGAAAATGGA ATTCCTTTAG GCAAGTATGT CGATGCCAAT
ATACCCCCAG TATTAACGTA TAACGATATG TTGCGTAAGA AAGCCACTAT TGGCTGTTCT
ACAGTTATTC TATCTTCTAA GTTAGTAGGT GAATTTAAAA TGCCTCTTCT TCGGACTGGT
CAGGATTATG CCACTTGGTT GTTATTACTT AAAAAAGTTG AGGTTGCACA CCACTTCCCT
AAAGTTTTAA CTAAATATCG CGTTTGTAAA AACTCTATCT CTAGAAATAA ATTCAAGAAA
GCTAAAAGGC AGTGGCAAAT TTATAGAGAA GTTGAAAAAT TACCATTTTA TGAGTCTATT
GTTTGTTTTT GTTTTTATGC ATGGCGAGCA GTGTTTCGTA AATAA
 
Protein sequence
MNINEPSVSI IMATYNSEKF LRETLDSICC QTYGNWELII TDDSSTDNTS DILRDYSERY 
NNIFYSINEV NQGAAISRNK CISQAKGMYI AFIDSDDLWA HNKLEKHIHF IAEHNSAISF
TSYELMNENG IPLGKYVDAN IPPVLTYNDM LRKKATIGCS TVILSSKLVG EFKMPLLRTG
QDYATWLLLL KKVEVAHHFP KVLTKYRVCK NSISRNKFKK AKRQWQIYRE VEKLPFYESI
VCFCFYAWRA VFRK