| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2040 |
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| Symbol | |
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| ID | 3519899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2113333 |
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| End bp | 2114772 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637284500 |
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| Product | amino acid permease family protein |
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| Protein accession | YP_268768 |
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| Protein GI | 71279441 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0153737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCG CAACGAAAAT ACTAGCAGAA ACAGCAGAGG ACACTAATGC CCTCAACAAA
TCCTCCGGTG GGACCGGCCA TCTTAAACGC GTTCTAGGTC TCCGTTCCCT GCTATCTGTA
GCTATCGGTT TGGTAGTCAC TCAAGGGGTA ATGGTTTTAG CATTGCAAGG TCTCGGCATT
GCAGGCATTG GTTTTTTTAT CGCCATGGCA ATCGCCTTCG TATTGGCGCT GTTCGCAGCC
TTCAGTTTTG CTGAACTTTC CTTAATGATG CCACGTGCTG GTACCCTTAG TACCTATACC
CAAGTAGCTA TTGGACAATT CCCTGCGATT GTTGCTACAT TTTCAGGATA TGTCGTGGTC
GCCATGTTTG CAGTAGCGGC AGAACTTCAA TTGATAGGAC TTATCCTGTC AGAAATATTC
CCTAACTTCT TATCGCCGAT GGCGCTGGGC TTGCTCATCC TCGGGATATT CGCCGTGCTC
AATATCGTCG GTGTTGATAT CTTCGCCAAG TTACAGACGG TGCTTGCTTT TACCATGGTT
GTGTCTATCT CGGTACTTGG GGCTGCTGCT ATCTTGGGCA CCAATGAACC ACAGCTGAGC
AACCTAGACT TGTTCTCCGA TTGGAATCCT ATTGGCACTG AGGTATTCTC TCTGATTGCC
TTAGCTATCT GGTTATTTGT CGGTGCAGAG TTCGTTTGCC CACTCGTTGA AGAAACTAAA
AATCCTGAAA AAAACATCCC TAAAGCCATG TTTTATGGAC TATTTACTAT TCTTGGAGTC
TACCTACTGT TTTGTATTGG TGCCTTCTTC TACATGCCAC TTGAGCAGAT GGCTAGCTCG
TCACTCCCTC ATCTAGATTA TGCCGTCGCC GTGTTTGGTG ATTCTGGTCT GGAAGTTCTA
GCCATCGTTG CTATCACTGC TACCTGTAGT ACAGTGAATA CCACTCTGGC TTCAGTACCA
CGTATGTTGT ACGGTATGGC GAAAAACAAG CAGGCATTCC CAATATTTAA GCGTCTAGAT
AGCCGTTTTA ATACCCCAGC TATTGCAATA TTATTCATGG CCGCCATCAT AGGTGCTCCT
TTGATCATCT TGGGTGACAA ACCTGATACC GTTGTGATAC TACTAATCGC CGCGTCAACC
TGTTGGTTAC TGGCCTATAT TATTAGCCAC ATCGATGTTA TCGTTCTAAG AAAACGGATG
CCTGACGCAA ATCGCCCTTT CAAAACTCCT TTTTACCCTA TACCGCAAGT CCTTGGTATT
ATTGGTATGG GCTACGCCGC TTACTACAAC TCACCGTCTC CGGAACTAAC CCAACAGGTA
TTCCTTACGG CAGGAGCGGT ATTGGCTGTG GTCTCTGTCA TAGCAGCGCT CTGGGTCAAG
TTATATATGA AAAAGGATCT ATTTCAACCT GAAAGTATGG AAGATGTTCT TAAGGGTTAA
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| Protein sequence | MSTATKILAE TAEDTNALNK SSGGTGHLKR VLGLRSLLSV AIGLVVTQGV MVLALQGLGI
AGIGFFIAMA IAFVLALFAA FSFAELSLMM PRAGTLSTYT QVAIGQFPAI VATFSGYVVV
AMFAVAAELQ LIGLILSEIF PNFLSPMALG LLILGIFAVL NIVGVDIFAK LQTVLAFTMV
VSISVLGAAA ILGTNEPQLS NLDLFSDWNP IGTEVFSLIA LAIWLFVGAE FVCPLVEETK
NPEKNIPKAM FYGLFTILGV YLLFCIGAFF YMPLEQMASS SLPHLDYAVA VFGDSGLEVL
AIVAITATCS TVNTTLASVP RMLYGMAKNK QAFPIFKRLD SRFNTPAIAI LFMAAIIGAP
LIILGDKPDT VVILLIAAST CWLLAYIISH IDVIVLRKRM PDANRPFKTP FYPIPQVLGI
IGMGYAAYYN SPSPELTQQV FLTAGAVLAV VSVIAALWVK LYMKKDLFQP ESMEDVLKG
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