| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2036 |
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| Symbol | potD |
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| ID | 3520492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2108744 |
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| End bp | 2109772 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637284496 |
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| Product | spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein |
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| Protein accession | YP_268764 |
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| Protein GI | 71280029 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0853075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATATA TTACAAAAGT CAGTTTATTA GCTTTGAGTA TTTCTCTGAC GACAGGAGCA
AACGCAGAGA ATAACCAACT TAATGTTTAC ACTTGGGCAG AGTCGATAGA TCCAGTGTTG
ATCGAGAACT TTCAAAAAGA AACTGGCATC GAAATTACTT TGGACAGCTA TACTTCGAAT
GAAGATTTAC TGGCAAAGCT TAAATCTGGC AGCAGTGATT ATGATGTTGT TTTCCCTAGC
CAACATTTCG TTAAAATAAT GATTCAAGAA GGTTTATTGA AAAACATTGA TGCCAAAAAT
ATGACGGCAT TCAAACAAGT TGATGATAGG TGGAAGAATA AGTGGTGGGA TAAAAGTTCA
GAGTATTCTA TTCCCTTTGT TTACGGTACC GCGGGCTATA CAGTTAATCG TGATAAATAT
AAAGGCCCGG CAAATTCTTG GAAAGAATTT TTTGAGCCTA CAGGCGCCGC AGCGGGAAAT
GTAGCTGTAT TTAGTACTCC AGATGAAATA ATTCCTGCAG CTCAACTGTA CTTAGACATA
GATTTTTGTA CTGAAAAGAG AACGGATATG AAAAAAGTGT ATCAGCTGTT AAAAAAACAG
AAAGAATATG TGGCCGTTTA CAGCTCAGAT AACATCAGCT CACGCATCTC CAGCGGAGAG
GTCGTAATGC ACAATTGGTG GGATGGCGAT TCAATGCGTG CACGTAAAAA TAACAACGCA
CCAATTGAAT ACGCGCAACC TAAAGAAGGC TTAGTGGGTT GGTTGGACTC TATGGTAGTT
CCTAGGAATT CACGTAATTC AGATAATGCT AAAACCTTCA TTAACTGGAT GAGTGAGAAA
GACAATGCCA CAATTGAGTA CAATTATTAT GCACATTCCT CTGCAGTAGC CATTGATGAG
AGTAAAGCAA TACATAAAAA GGAAAATTCA CCTGAAATAT TCCCAACAGC TTTCATTAAG
TTTACCCGCG CTTGTTCGCC TGCAGCACAA AAGTTAGTGG ATAAGGTATG GACCAAATTA
CTACAGTAA
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| Protein sequence | MKYITKVSLL ALSISLTTGA NAENNQLNVY TWAESIDPVL IENFQKETGI EITLDSYTSN
EDLLAKLKSG SSDYDVVFPS QHFVKIMIQE GLLKNIDAKN MTAFKQVDDR WKNKWWDKSS
EYSIPFVYGT AGYTVNRDKY KGPANSWKEF FEPTGAAAGN VAVFSTPDEI IPAAQLYLDI
DFCTEKRTDM KKVYQLLKKQ KEYVAVYSSD NISSRISSGE VVMHNWWDGD SMRARKNNNA
PIEYAQPKEG LVGWLDSMVV PRNSRNSDNA KTFINWMSEK DNATIEYNYY AHSSAVAIDE
SKAIHKKENS PEIFPTAFIK FTRACSPAAQ KLVDKVWTKL LQ
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