| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1959 |
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| Symbol | |
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| ID | 3521083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2021891 |
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| End bp | 2025007 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637284421 |
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| Product | putative RND efflux system protein |
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| Protein accession | YP_268689 |
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| Protein GI | 71280615 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAT CAATATTACG TTTCTCCATC GCGCGTCGTT GGCTGATGAT GACCATGATA
TTTGTACTCA TCGGTCTTGG TTATTGGAGT TATCAAAAAC TTCCCATAGA CGCAGTGCCT
GACATTACTA ATGTGCAAGT GCAAATTAAT ACCCGTGCGC CAGGTTATTC ACCACTTGAA
ACGGAGCAGC GCATTACTTT TCCGGTCGAA ACGGCGCTTA CTGGTATTCC TAATTTGTCA
TACACGCGCT CCATCTCACG TTATGGATTA TCGCAGGTCA CGGTGGTTTT TAGTGAAGAT
ACCGATTTAT ATTTTGCCCG TAATTTGATT AACGAAAAGT TAAGCGCCAT TAAAAATAAA
ATTCCCGCAG GTCTAGAGCC TGAAATGGGG CCGATATCAA CGGGATTGGG AGAAATTTTC
ATGTATAGCG TGGTGGCATC ACCACAGGCA GTAAAAGCAG ACGGTTTATC CTATGACGCA
ACGGCTTTGC GGGAAATTCA AGATTGGATT ATTAAACCTC AACTTGCATT GGTGCCCGGC
GTTACAGAAA TAAATACGAT AGGAGGGTAT GACAAACAAT ACCATATCAC GCCATTGCCT
AAAAAAATGC TCGAATTTTC AATCTCCTTT AACGATATCA ATGTTGCCTT AAGTAATAAT
AATAGCAATC GAGGGGCAGG TTACATAGAA CAAAATGGTC AGCAACTTAC GGTTAGATCG
CCGGGTCAAC TCGCCAATAT CAACGATATA GAACAAGTGA TTGTTAAAGT CATTGATGAT
ACACCAGTGC AAATATCAGA TATTGCCCAA GTTGCTATCG GTAAATCACT TCGCACGGGT
GCTGCAACAT CTGCTGGTAA AGAAATAGTA CTCGGCAGTG CCATGATGTT GGTGGGTGAG
AACTCTCGGG TAGTTGCCTT AGCGGTAGCT AAAAAGCTTG AGAAAATAAA ATTGTCACTA
CCAAAAGGCG TTATCGTTGA GTCGGTATAT GACCGAACAA CACTGGTTGA TAAAGCCATG
TACACAGTAC AAAAAAACTT AGTTGAAGGG GCTTTACTGG TCATCATTGT GCTCTTTCTT
TTACTAGGCA ATGTTCGAGC AGCATTAATT ACTGCAGCAG TAATTCCCTT AGCTATGTTA
GCAACGATCA CTGGTATGGT GAAAACAGGT GTTTCAGCCA ACTTAATGAG TCTTGGCGCA
CTTGATTTTG GTTTAATTGT TGATGGTGCA GTGATCATTG TTGAAAACTC CATTAGACGG
TTAAGCGATG CGCAAAAACT CCAAGGCGGT ATTCTTTCTC GAAAAGATCG GTTACATGTC
GTTTATTCGG CAACGAATGA AGTGATCAGA CCAAGCTTAT TTGGCGTCTT CATTATTACC
ATTGTTTATA TTCCGTTATT TAGTTTAACG GGTGTTGAAG GGAAGATGTT CCACCCTATG
GCGGCAACTG TAGTGATGGC ATTGATAGCC GCACTTGTTT TATCTTTAAC CCTTGTGCCT
GCTGCCGTTG CTTTATTTAT GAAGGGTAAA ATTAGTGAGA AAGAAAGCCC AGTGATCAGT
GCCGCTAAAA GTGTGTACAA GCCACTTCTT ATTGGTGCAA TGAAGCTACG TTGGATAATT
TTACTGGCGT GTGCTGCTTT GGTCGCTTTT TCAATTTGGT TAGCGACCAC ACTGGGCTCT
GAATTCATTC CGCAGCTCAA TGAGGAAGAC TTACTGTTGC AAGCAATCCG CATTCCAGGT
ACGAGTTTGA GCCAATCGAT TGAAATGCAA AAAGCACTGG AATTAAAAAT ACAGCAATAC
CCTCAAGTCA AAAATGTATT CTCTAGAATT GGTACGCCAG AAGTAGCTAA TGATCCTATG
CCACCTAATA TTGCTGATAC TTATGTAATG CTAATACCTC GGAGCCAATG GCCTGATCCG
AAGTTAAGTC ATGGTGAATT GGCTGCACAA ATTGTTGTGT CAGTTTCTGG CCAACCGGGA
AACAATTTTG AGCTAACCCA GCCCATTGAA ATGCGTTTTA ATGAACTGAT TTCTGGCGTT
AGGGCAGATC TTGGCATCAA AGTTATTGGT GATGATCTAA ACCAGCTACT TAAATCAGCG
AATGCCATTC GAGAAGTGAT AGAAAAAATT GAAGGCGCTA GCGATATTCA AGTTGAGCAG
GTAACGGGAT TGCCAATGTT ATCGATACAC CCAAAAAGGG TTGAACTTGC GCGCTATGGT
CTTAATGTCT CACAACTGCA ATATGCTTTA TCTACAGCTA TTGGTGGCGA GAAAGCAGGG
GTGATTTATG AGGGGGACCG CCGTTTTGAT ATCGTGGTAA GACTGCCAGA GCAAGTTAGA
CAAAATGTTA ATCGGTTAAG CGAGTTGCCA ATTGCTCTGC CTAATGGGAA TTATGTTCCA
TTGTCTGAAG TGGCTATATT GGAGCTAGCG CCTGCACCTA ATCAAATTAG TCGAGAAAAT
GGTAAACGAC GTATCGTGGT AACCGCCAAT GTACGTGGTA CTGATTTAGG CTCGTTTGTT
AAAAATGCCA AGCAACAAAT CCAAGATAAT GTTGAGATAC CTGCTGGTTA TTGGCTTGAG
TACGGTGGCG CTTTTGAACA GTTAGAATCG GCAAGTAAAC GCTTAACCAT TGTTGTTCCG
CTCACCTTAG CATTGATTTT AGGGCTGTTA ATCATGGCAT TTGGCAATCT AAAAGATGCT
TTGATTATAT TTACAGGTGT CCCATTAGCG CTTACTGGGG GTGTTCTTGC TTTGTGGTTT
CGTGGTATGC CCTTATCTAT TTCAGCAGGT GTAGGTTTCA TTGCGCTTTC TGGTGTGGCC
GTGCTCAATG GTTTAGTCAT GCTCTCCTTT ATTCGTGATT TATGTAAAGA ACGCGGAGAA
CTTATGTCTA GAATTATTGA TGGCGCTATG ATCAGATTAA GACCTGTTTT GATGACGGCT
TTAGTCGCTG GACTAGGTTT TGTTCCTATG GCGCTTAATA TAGGTACGGG TGCAGAAGTA
CAGCGACCAT TAGCCACCGT AGTGATTGGT GGAATTATCT CGTCTACTTT GCTTACTTTA
TTTGTATTGC CAATACTTTA TCGGATTGCG CATCAAAGTG ACTTCAAGCG GGCTTAG
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| Protein sequence | MIESILRFSI ARRWLMMTMI FVLIGLGYWS YQKLPIDAVP DITNVQVQIN TRAPGYSPLE
TEQRITFPVE TALTGIPNLS YTRSISRYGL SQVTVVFSED TDLYFARNLI NEKLSAIKNK
IPAGLEPEMG PISTGLGEIF MYSVVASPQA VKADGLSYDA TALREIQDWI IKPQLALVPG
VTEINTIGGY DKQYHITPLP KKMLEFSISF NDINVALSNN NSNRGAGYIE QNGQQLTVRS
PGQLANINDI EQVIVKVIDD TPVQISDIAQ VAIGKSLRTG AATSAGKEIV LGSAMMLVGE
NSRVVALAVA KKLEKIKLSL PKGVIVESVY DRTTLVDKAM YTVQKNLVEG ALLVIIVLFL
LLGNVRAALI TAAVIPLAML ATITGMVKTG VSANLMSLGA LDFGLIVDGA VIIVENSIRR
LSDAQKLQGG ILSRKDRLHV VYSATNEVIR PSLFGVFIIT IVYIPLFSLT GVEGKMFHPM
AATVVMALIA ALVLSLTLVP AAVALFMKGK ISEKESPVIS AAKSVYKPLL IGAMKLRWII
LLACAALVAF SIWLATTLGS EFIPQLNEED LLLQAIRIPG TSLSQSIEMQ KALELKIQQY
PQVKNVFSRI GTPEVANDPM PPNIADTYVM LIPRSQWPDP KLSHGELAAQ IVVSVSGQPG
NNFELTQPIE MRFNELISGV RADLGIKVIG DDLNQLLKSA NAIREVIEKI EGASDIQVEQ
VTGLPMLSIH PKRVELARYG LNVSQLQYAL STAIGGEKAG VIYEGDRRFD IVVRLPEQVR
QNVNRLSELP IALPNGNYVP LSEVAILELA PAPNQISREN GKRRIVVTAN VRGTDLGSFV
KNAKQQIQDN VEIPAGYWLE YGGAFEQLES ASKRLTIVVP LTLALILGLL IMAFGNLKDA
LIIFTGVPLA LTGGVLALWF RGMPLSISAG VGFIALSGVA VLNGLVMLSF IRDLCKERGE
LMSRIIDGAM IRLRPVLMTA LVAGLGFVPM ALNIGTGAEV QRPLATVVIG GIISSTLLTL
FVLPILYRIA HQSDFKRA
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