Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1905 |
Symbol | |
ID | 3519372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 1965445 |
End bp | 1966212 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637284367 |
Product | glutathione S-transferase family protein |
Protein accession | YP_268635 |
Protein GI | 71279131 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.225069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTCAT TCATGCTTTA TCATCATCCT TTATCCGTGT GTTCAATGAA GGTTCGACTA GTACTTGAAG AAAAAGGACT TGCTTGGTCG GGACGGGTTA TCGACATTGT ACAAAAGCAA GACCAACTAG ACCCATGGTA TTTGAAACTA AACCCAAAGG GAGTCATTCC CACGTTGGAG TTTCGAAACG GCACAACAAA AGTATTGACT GACTCTGCTC ATATCATTCG GTTTGTCGCT TCTGTTTCTG AAGGTAACGT CTTGTTGCCT CAAGATGAAA ACGATCTTCA GTTAATGGAG AGATTAATTG ACTTGGCAGA TGATATTGAT CTTCAAATTC TCAGTTACGC ACGTCACCCT TCAATGGAAA AATCTGAAAA GATATTGAAT GCTCGAGTTA CAAAATCACT TTTAATGTCT AAACAACTCC CTGAACTTAG CGATAATTAC CTTGTTTGTG CTGAGCGTTC ACAAAAGAGC AAAACGTTTC GGGTTGATAA TACACATATC GAAAATATTG AACAAAGTGC ATTGGAAGCC ATTACATTTG TTGAAAAACT CTTACAAGAT AATGAATTTC TAATAGGCAA TACCTACACC TTAGCTGATG TAATTTGGAC GGTGATACTC TCAAGACTAG ATTTGTTGGG CTACAGTAAA TGGTTAAACA ATAATAGTTT TCCACAGATA GCTAGCTACT ATTTAAGAAT GCAACAGCGA AAAAGTTACA CCCTTGCTCA GATTCAAAAC GAGTGGTGGG ACAAATAA
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Protein sequence | MTSFMLYHHP LSVCSMKVRL VLEEKGLAWS GRVIDIVQKQ DQLDPWYLKL NPKGVIPTLE FRNGTTKVLT DSAHIIRFVA SVSEGNVLLP QDENDLQLME RLIDLADDID LQILSYARHP SMEKSEKILN ARVTKSLLMS KQLPELSDNY LVCAERSQKS KTFRVDNTHI ENIEQSALEA ITFVEKLLQD NEFLIGNTYT LADVIWTVIL SRLDLLGYSK WLNNNSFPQI ASYYLRMQQR KSYTLAQIQN EWWDK
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