| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1868 |
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| Symbol | pfoR |
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| ID | 3522273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1918622 |
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| End bp | 1919653 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637284330 |
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| Product | perfringolysin O regulator protein |
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| Protein accession | YP_268598 |
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| Protein GI | 71281801 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAC TTAAGGGTAT TACCCTTCTT CTCGCTGCGT TAACCGCATT TTCTTTATTT
AGTCGTTTTG CGCCCTACGG CACAAAAGCC ATGGGCGGAC TTGCCTCCGC GGCGGTTGCT
AGTTTTCTCG TTGAAGCTAT TCATGCCTAC ATCTCAGGTG ATTTTCTTGG AATTGATTTC
CTAAGAGAAA CTGGCCTCGC TGCGGGGTCT ATGGGAGGGC CTGCTGCGGC AGCTCTTGTC
GCATTAGCCT TAGGTGCTAA TCCTGTTTTT GCCATCGTTG CTGCTATTGC CACTAAAGGA
ACCGGTATAT TGGCTGGTTT TATTGCAGGC TATATTTGTT ACTTTATTTC CAAAGTTATT
GAAAAACACC TTCCTGAGGG GATCGATGTT ATCGTTGGCG CTTTAATTCT CGCACCGTGT
GCTTATATCA TTGCTCATGC ATCAGGGCCT GTCGTCGGTA GTATTATGGC CATTATAGGC
TCAGCTATCA CTGGGGCTAC TTCTGCATCG CCTTATGTTA TGGGCTTTTT ACTTGGTGGC
TTAATCAAAA TGATCTGTAC TTCACCATTA AGCTCTATGG CACTTACTGC TATCCTAGGT
TTGACGGGTC TTCCTATGGG AATAGCTGCA ATTGCCTGTG TTGGCGGATC TTTCACTAAT
GGTATCTTAA TGAAGAGACT CAAATTAGGC GATAGAAACA AAGTTATCGC TATTATGTTG
GAGCCACTCA CCCAAGCGGA TATTGTCACA AGAAATGCCT TCAAGATTTA TTCTTGTAAC
TTTTTCGGCG GAGCCTTATC TGGTTTAGTT GCGGTTTATT TTAATATCAT CAACGATGCT
CCGGGAACTG CTGCTCCAAT ACCTGGTTTA CTTGCTCCTT TTGCCTTTAA TGAAGCGAGT
ACTGTATTAA TGGCTGTTTT GGCTGCGTCT ATTTGTGGTA TTGCCGCAGG TTATGTTGGC
AGTAGTATTC ATCTAAAGTT AGATGAAAAA CGTGCCAATA AACTTAGCGG AGTTACTCCG
GTAACTACTT AA
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| Protein sequence | MELLKGITLL LAALTAFSLF SRFAPYGTKA MGGLASAAVA SFLVEAIHAY ISGDFLGIDF
LRETGLAAGS MGGPAAAALV ALALGANPVF AIVAAIATKG TGILAGFIAG YICYFISKVI
EKHLPEGIDV IVGALILAPC AYIIAHASGP VVGSIMAIIG SAITGATSAS PYVMGFLLGG
LIKMICTSPL SSMALTAILG LTGLPMGIAA IACVGGSFTN GILMKRLKLG DRNKVIAIML
EPLTQADIVT RNAFKIYSCN FFGGALSGLV AVYFNIINDA PGTAAPIPGL LAPFAFNEAS
TVLMAVLAAS ICGIAAGYVG SSIHLKLDEK RANKLSGVTP VTT
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