Gene CPS_1865 details

Gene Information

• Locus tag: CPS_1865
• ID: 3522541
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1915091
• End bp: 1915762
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637284327
• Product: DNA-binding response regulator
• Protein accession: YP_268595
• Protein GI: 71282069
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAATAT TACTGGTAGA AGATTGTCAA AGTGTTGCTG AAGTTATTTT TGATTACTTT 
GAAGAATCAG ATTTTGACCT CGATTATGCT GCTACTGGCA ATTTGGGATT ATCCTTAGCA 
CAATCTCAAA AGTTTGACTG TATTATTCTA GATATCATGT TACCAGGTCT TGATGGTATT 
AGTCTTTGTC AGCAACTTAG AGCTGAGGGC AATAACACGC CAATTATCAT GTTAACTGCA 
AGAGATACTA ATGATGATAT GTTACTAGGA CTTCGCCAAG GAGCCGATGA TTATATTGTA 
AAACCTTTCA ATTTAGAATT ACTCGAAGCA CGCATTCACA GTGTTACTCG TCGTCATTCA 
GGGTCAGGTT TTATCACACA AATGACTTGT GGCCCTATTA CTCTCGATAT AAATACCCAT 
CAAGTATGGC GGGGTAAGCA AGAAATAAAA TTAACCCCTA TTTGTTTTAA AATATTGAAT 
CTGTTAGTTA AAAATTCACC CAATGTGGTT TCTCGTCAAG AAATAGAAGA AGTATTGTGG 
TCTGATGATT TACCCGACCA AGATATATTA CGAAAACATG TCTATCAGCT TCGTCATAAG 
GTAGATAAGC CCTTTACAGA CAATATTATA GAGACGGTAC CTAAATTGGG CTATCGCTTG 
GTGCCAGCTT AA 

 

Protein sequence

MKILLVEDCQ SVAEVIFDYF EESDFDLDYA ATGNLGLSLA QSQKFDCIIL DIMLPGLDGI 
SLCQQLRAEG NNTPIIMLTA RDTNDDMLLG LRQGADDYIV KPFNLELLEA RIHSVTRRHS 
GSGFITQMTC GPITLDINTH QVWRGKQEIK LTPICFKILN LLVKNSPNVV SRQEIEEVLW 
SDDLPDQDIL RKHVYQLRHK VDKPFTDNII ETVPKLGYRL VPA