Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1857 |
Symbol | |
ID | 3519284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1906313 |
End bp | 1907116 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637284319 |
Product | hypothetical protein |
Protein accession | YP_268587 |
Protein GI | 71279199 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG5266] ABC-type Co2+ transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0373875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAA CTTTACTAGC AAGCGCTTTA TTATCTACCT GTTTTTCACT ACAAGCTCAT GATATTTGGA TAAAAGCAGA TACTCATGAA ATAAACAATG ATGAACAGAG CGTTTTTGCA TTAGACGTAT CTCGCTCTGC TCAAGCCTAC ATTGCAGAAG CGAATCATGG TATTAAATCT CTTCAAATGA GTTCACCGAA CGGGCAATCT AAAAAAATTA TTGCTGATTA TTCAGGTAAG GTTAAAGAAG TTTTTGAAGT AGAGTTCAAT GAAGCGGGTA CTTATCACTT TGAAAGTCCA ATGACACAAG TTTTTCTTTC TTTTTATTTT GATGAAGCAG GTAAAAAGCA TAAAATTCGT ATGCCAAAAA CAGACTATCA CACCTTACCT AAAGGCTCTA AACCTGAAAA AACAGTAGAA AAGCAAATTA TCACCGAAAC ATACGTAAGC TATAACGGCT TTAGTGACGT AAAACAAACC AGTAAAGATG GTTTGCAAAT CGTATTAATG CAGCACCCTA ACAAATTAAG GGCGGGTGAG CCATTAAGCT TTACCTTAAC TTATAATGGT CAACCTATCC CTGAAGCTGA AGTTGCGCTG AAAAGCCTGA ATGAATTTTA TTACCAAGAC AGTGATAAAA TTGAAGTGGA CATAACATCA AAAGACAAAG GTCAGGTAAC GTTTAATCCT AAACATCCAG GACGTTATTT ATTAGGTGTT GAATATGGTT TACCCTTAAA AAACAATGTA AAAGCAGACT TTAGATCTAT TGAAAAATTT TTAACTTTTG AAATTACTCA GTAA
|
Protein sequence | MNKTLLASAL LSTCFSLQAH DIWIKADTHE INNDEQSVFA LDVSRSAQAY IAEANHGIKS LQMSSPNGQS KKIIADYSGK VKEVFEVEFN EAGTYHFESP MTQVFLSFYF DEAGKKHKIR MPKTDYHTLP KGSKPEKTVE KQIITETYVS YNGFSDVKQT SKDGLQIVLM QHPNKLRAGE PLSFTLTYNG QPIPEAEVAL KSLNEFYYQD SDKIEVDITS KDKGQVTFNP KHPGRYLLGV EYGLPLKNNV KADFRSIEKF LTFEITQ
|
| |