Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1856 |
Symbol | |
ID | 3519708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1905680 |
End bp | 1906165 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637284318 |
Product | hypothetical protein |
Protein accession | YP_268586 |
Protein GI | 71278107 |
COG category | [S] Function unknown |
COG ID | [COG3656] Predicted periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0958229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAATCAG CATTGACGTT CTGCATAACT TTATTGTGTG GAATAATTTT TATGAATAAC TCTTCAGCCA ACACGGAAGC CTTATTCGCA CAGAAGTTGT TTGTTCAAAT TGAGCTAACT CCTTTTCTAA CAAAACATCA GCCTCCTTAT TTTGCGCTGT GGTTAAGTAA TGATAAAAAG CAGCATAAAG CACTCGTTGT AATCAGAGAG AAGGTCAAAT GGTTAAGGGA TTTAAAAAAA TTCTGGCGTG ATATTGCGCG TGAAAATAGA AGTGAGAGTG ATGCTGTTAC CAGTGCAACA AATATAAATA AGAAATTTAA TTATAGCTAT GAAATAGAAG GTATTTGGCA ATATATATCG CTAGAAGTTG TGCGTGAAAA TGGCAGCAGA GAGTTAATAT ATTTTCCTCT ATCCTCAAAG GATGCATGTA TTCAGGGAAA AGTAGAAATA GTCGTGCTTT GCGCTCAGTT AGCCATTAAC GACTAG
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Protein sequence | MKSALTFCIT LLCGIIFMNN SSANTEALFA QKLFVQIELT PFLTKHQPPY FALWLSNDKK QHKALVVIRE KVKWLRDLKK FWRDIARENR SESDAVTSAT NINKKFNYSY EIEGIWQYIS LEVVRENGSR ELIYFPLSSK DACIQGKVEI VVLCAQLAIN D
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