Gene CPS_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1856 
Symbol 
ID3519708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1905680 
End bp1906165 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content36% 
IMG OID637284318 
Producthypothetical protein 
Protein accessionYP_268586 
Protein GI71278107 
COG category[S] Function unknown 
COG ID[COG3656] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0958229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATCAG CATTGACGTT CTGCATAACT TTATTGTGTG GAATAATTTT TATGAATAAC 
TCTTCAGCCA ACACGGAAGC CTTATTCGCA CAGAAGTTGT TTGTTCAAAT TGAGCTAACT
CCTTTTCTAA CAAAACATCA GCCTCCTTAT TTTGCGCTGT GGTTAAGTAA TGATAAAAAG
CAGCATAAAG CACTCGTTGT AATCAGAGAG AAGGTCAAAT GGTTAAGGGA TTTAAAAAAA
TTCTGGCGTG ATATTGCGCG TGAAAATAGA AGTGAGAGTG ATGCTGTTAC CAGTGCAACA
AATATAAATA AGAAATTTAA TTATAGCTAT GAAATAGAAG GTATTTGGCA ATATATATCG
CTAGAAGTTG TGCGTGAAAA TGGCAGCAGA GAGTTAATAT ATTTTCCTCT ATCCTCAAAG
GATGCATGTA TTCAGGGAAA AGTAGAAATA GTCGTGCTTT GCGCTCAGTT AGCCATTAAC
GACTAG
 
Protein sequence
MKSALTFCIT LLCGIIFMNN SSANTEALFA QKLFVQIELT PFLTKHQPPY FALWLSNDKK 
QHKALVVIRE KVKWLRDLKK FWRDIARENR SESDAVTSAT NINKKFNYSY EIEGIWQYIS
LEVVRENGSR ELIYFPLSSK DACIQGKVEI VVLCAQLAIN D