| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1849 |
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| Symbol | |
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| ID | 3521081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1900711 |
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| End bp | 1901829 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637284311 |
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| Product | putative RND efflux system protein, MFP subunit |
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| Protein accession | YP_268579 |
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| Protein GI | 71280613 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACATT TCATTTTTAA GCCATGGACG GCAATCATCG CCTTGGTCGC AGTTATTAGC
TCTGCCGCTA TTTTAGCAAC ATCACCAACC CAAGAGTTGT CCGCACAAAC GGAAAAGGTA
TTATCGGTAA GTGTTATTGA TGTTTTACCA CAAGTATTTA CGCCAAGTTA TCAAGCTTTT
GGAAAAATTG AGTCGCCTCA CCTATTATCA TTGACGGCTC AAGTTGAAGG AGAAATAACG
TATATTAATA AAGCATTTAT TGAGGGAGCC CACCTTTTAA AAGGCGAAAT AATTTATCAA
ATAGATGGCA GTGACTATCG ACATAAGTTA AAGCAACGGA ACAGCGAATT AAAAATCGCT
CAAGCGAACT TACAGTTAGA ACTTGGTGAG CAAAAGGTTG CAGAAAGAGA GTATCAGCAA
ATTAGTGCTG ATTTCAGTGG TGAAAACATC ATTTTGCAAA AGTCACTGAT GTTGCGTCAA
CCACAATTAG AAACAGCAAA AGCAAATGTT ACTATCGCAC AAAGCAATGT GAATCTTGCT
AAAAAAAATC TGCAAAGGTG TGTTGTCGTC AGCAGTGAAA ACTATACCGT ATTAACGAAA
ACGATTTATC AAGGAAGTTT TGTTAACAAA GGCGATAATT TGGGAGAATT GGCGCAACTT
TCAATATTAC GGGTTTCACT CGCTGTTCCC AGAGATATCG CGACAGTGTT AAGCATAAAC
CAAGTCGTTA ATATTTCAGC TGAGAGTAAT AACAGTCATC AAGCATTGGT ATCACAATTA
TCGCCTAACT TGCATGATAA TAGCCAATTG CAACAAGTTT ACCTGAGCAT AATAAACCCA
GAAAAACCCT TCATCTTGGG AGAGTTCATT ACTGCCGACT TAACATTAAC ACCACAAAAA
AACACGTTAA AAATACCGCT TAGCGCGATT GACGATAGTG TTTTCTGGGT TGTAAACGAA
GACAATAAAC TATCGGCAAA AGCTGCAAAA ATTATTTGGC AAAACGAGAG CTATGCCATT
ATTAATAACA ATATAGCCAA AGGTGAATCA ATCGTTACCA GTGCAATTGC AGGTGCACAA
GAAGGCATGC TAGCAAATAT CGTGACGGGA GTTTTGTAA
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| Protein sequence | MQHFIFKPWT AIIALVAVIS SAAILATSPT QELSAQTEKV LSVSVIDVLP QVFTPSYQAF
GKIESPHLLS LTAQVEGEIT YINKAFIEGA HLLKGEIIYQ IDGSDYRHKL KQRNSELKIA
QANLQLELGE QKVAEREYQQ ISADFSGENI ILQKSLMLRQ PQLETAKANV TIAQSNVNLA
KKNLQRCVVV SSENYTVLTK TIYQGSFVNK GDNLGELAQL SILRVSLAVP RDIATVLSIN
QVVNISAESN NSHQALVSQL SPNLHDNSQL QQVYLSIINP EKPFILGEFI TADLTLTPQK
NTLKIPLSAI DDSVFWVVNE DNKLSAKAAK IIWQNESYAI INNNIAKGES IVTSAIAGAQ
EGMLANIVTG VL
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