Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1841 |
Symbol | |
ID | 3521064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1892011 |
End bp | 1893198 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637284303 |
Product | hypothetical protein |
Protein accession | YP_268571 |
Protein GI | 71280596 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0803735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAGCTAT TACAAACCAT TAAAAATGAA TGGCAATTAA TTTGTCATGA TGCTTGGTTA AAAGCATTGC TTTTTTGGTT GCCAGTAATA CTTGCTATCG CGATATGGGG CGTATTCTCT GCAGGTATTG CGCGCGATTT ACCTATTGGT GTAGTAGATC ATGACAACAG TTCAGTATCA CGTTCGCTCA TACGATATTA TAATGCCAGT CCTACCTTAG CCGTAGTAAA GCATTTTAAC TCCATGGAGC ATGCCAATGC AGCCCTTAGA GAAGGGAGTA TCTATGCGTT AGTCATTATT CCAAATTCCT TAGAAAAAAA CACCTTGTTG GGCAAAATGC CTCAAGTGAC AGCCTTTTAT AATAGTCAGT TCATTTTGAT TGGTAAGTTA ATTAATTCGG CCATGCTAAG TGCTCATGGC ACTTATGTCG CCCAAATAGA AACCTTTAAA AACTTAGCAA ATACGCGTGG CAACGTAAAA CAAGCGATAG GGGAAGCACT ACCTATTTCG TCACAAATAT CGCCATTATT TAATGCTAAT ACGCATTATG GTCAATTTCT TGTTACTGCG GTTATTCCTG CTATGTGGCA AATTATTATT ATTGCGACTA TCGTACTTGT CTGGGCAAGA CCTCTGCAAA ATTCTTCATT AGAACAATGG CTTGCTCATC TTAATTTTAA TGAAGAACTG AAAAGGTTAA TCCCGTATAT TTTAATTTTT TGGATGCAGG GTATTATATA TCTCAGTGTG TTTTACGGCA CACTTCAGTG GCCCATGCAT GGAAGTTGGC TTTTATTGAT ATTAGCTCAA TTTTTCTTGG TCCTAGCCTG CGCAAGTGTT GCGACGTTAT TTTTCTTTAT TACCCTTGAT GTCACACGTG CCATGAGTTT GGTGGCGGGA TTCGCAGCCC CTGCATTTGC TTTTATGGGC GTCACATTTC CAACAACCGA TATGCCTTTA TTAGCGCAAC TGTGGCGGGC CTTATTACCT ATTAGTCATT ATATAACCGT ACAAATTCAG CAGGTGAATT ATGCAACAAC CCTTAATCAT AGTATTGGAA GCTTTGTTGC TTTAATCACT TTTGTGAGTG GCTTGTATAT TGCAAAATTA CTGGTTGAGA AACGCCAACG CTTAAATAGT TTACATGAAG CAAAGAAAGA AATTATCGAA AAAGGTTGTA ATTTATGA
|
Protein sequence | MKLLQTIKNE WQLICHDAWL KALLFWLPVI LAIAIWGVFS AGIARDLPIG VVDHDNSSVS RSLIRYYNAS PTLAVVKHFN SMEHANAALR EGSIYALVII PNSLEKNTLL GKMPQVTAFY NSQFILIGKL INSAMLSAHG TYVAQIETFK NLANTRGNVK QAIGEALPIS SQISPLFNAN THYGQFLVTA VIPAMWQIII IATIVLVWAR PLQNSSLEQW LAHLNFNEEL KRLIPYILIF WMQGIIYLSV FYGTLQWPMH GSWLLLILAQ FFLVLACASV ATLFFFITLD VTRAMSLVAG FAAPAFAFMG VTFPTTDMPL LAQLWRALLP ISHYITVQIQ QVNYATTLNH SIGSFVALIT FVSGLYIAKL LVEKRQRLNS LHEAKKEIIE KGCNL
|
| |