Gene CPS_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1797 
Symbol 
ID3522211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1843805 
End bp1844299 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content35% 
IMG OID637284260 
Producthypothetical protein 
Protein accessionYP_268528 
Protein GI71281739 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.378307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGC GTTTTGAGTC TTTGCTTTGG AGTAGCAGAT TACTTCTACT TTTTGGTGTT 
GTTTGTTGTG TGATCACAGC GGCAACTTTA ATCTTATTAG GTTGTGTCGA GGTGTTTCAC
TTATTACAAG GAATGTTCTC CTACCTAATT ACTCATAGTT CAGATGTTTC CCGAGATAAT
CTAGTACTCA TGGTGATCGA GATCCTTGAT ACATTCTTAC TTTCTTCTAT CCTCTTTATC
TTTGCCTTTG GTTTGTATGA ACTATTTATC AGTTCTATCG AAGAGTCTAA TAAACACCAG
TCAAAGGCCT TTCAAATTAG TAGTATTGAT GAGCTAAAAG CAAAATTGGG TAAGGTTATT
GTGATGATTT TAGTCATAAA GCTATTCTCA TATCTTGTTG AAATCAAGCC TCAAAATATT
GTTGAAATTT TATATATGGC CATCATAGTT CTACTAGTAT CAGTTAGCCT TTGGCTTGGG
CACGCCAAAA AATAA
 
Protein sequence
MEKRFESLLW SSRLLLLFGV VCCVITAATL ILLGCVEVFH LLQGMFSYLI THSSDVSRDN 
LVLMVIEILD TFLLSSILFI FAFGLYELFI SSIEESNKHQ SKAFQISSID ELKAKLGKVI
VMILVIKLFS YLVEIKPQNI VEILYMAIIV LLVSVSLWLG HAKK