| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1651 |
|---|
| Symbol | |
|---|
| ID | 3521086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 1698716 |
|---|
| End bp | 1699483 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637284114 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_268389 |
|---|
| Protein GI | 71280618 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.925362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACCAC CTAAGTTACT CGATAAAACA GCGCTTAAAG AAAGAGAGTT ATTGATAATT
AACTCAGCTG TGCTTCTTAT CCAACAAAAT GGTATTGAAA ACCTCACCAT GGATAAAGTG
GTTGCCCAAG TGCCATTTTC AAAAGGTACC GTCTATAAAC ACTTTATTGG TAAAGAAGAT
TTATTGTTAG CTATCAGTAA TTACTCAATC AAAGTACTTG GCGATCTTTT TCATCGCGCA
TATCAATTTA AAGGTTGTTC ACGTTCGCGA ATGCTTTTAT TAAATTTCTC TTACCTTATT
TATGCAATGT TATATCCTGC ATTATTTCAA ACGGTGCTTT GCTCAAAATC GCCTAACGTA
GTGGGAAAAT CAAGTGAAAA GCACATTAAT GATGGAGAGC AATTAGAAAT TAAATTAATG
ACCTCTATTC ACGGCATAGT AGAAGACGGT TTAAACGATA ATAGTCTCTC ACTTCTTATG
AATATGGATA TACAGCAACT ATGTTTTAGT AACTGGTCTA TGGCGTATGG TGCTATCACT
TTGCTTTCAG GTGAAGTTGA GCAGTGCAGT GGCAGAACCA GTTTAATTGT TGAACGTGAG
CTTTTTAACC TGAGTAACAT GTTATTTGAC GGTATGGGAT GGAAACCTTT TACAAAAGAC
AGAAGTCATT GTGCAGAACT AAAAATTGCA TTGGCTGAAT TATTTCCAGA AGAATTAGCG
CTTATTAGTG CAAAAGGACG AGAGCTAAAC TTTGATAGTT TTAGCTAA
|
|---|
| Protein sequence | MTPPKLLDKT ALKERELLII NSAVLLIQQN GIENLTMDKV VAQVPFSKGT VYKHFIGKED
LLLAISNYSI KVLGDLFHRA YQFKGCSRSR MLLLNFSYLI YAMLYPALFQ TVLCSKSPNV
VGKSSEKHIN DGEQLEIKLM TSIHGIVEDG LNDNSLSLLM NMDIQQLCFS NWSMAYGAIT
LLSGEVEQCS GRTSLIVERE LFNLSNMLFD GMGWKPFTKD RSHCAELKIA LAELFPEELA
LISAKGRELN FDSFS
|
|---|
| |