| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1452 |
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| Symbol | |
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| ID | 3519070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1494477 |
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| End bp | 1496291 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283915 |
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| Product | hypothetical protein |
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| Protein accession | YP_268194 |
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| Protein GI | 71278307 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCAAA CTAAACGAAG TCCTTTTCAG CGATCCTTTT ATGTAGCCAA TACCATGGAG
ATTTTTGAGC GACTTGCTTG GTATGGCATG TATACACTAC TTGCTAGTTA TATTATGACG
CCAAGTTCTC AAGGCGGCTT AGGTTTAGGT AATACTGAGC GTGGCTTGAT TATGGGCGTG
GTGCCTTTCT TTCTTTATCT TTTTCCTGTC ATTTCTGGCG CATTAGCAGA CAGATTTGGC
TATCGAAAAA TGTTCTTATT GTCTTTTATT TTAATGGCGC CGAGTTATTA TTTCTTAGGT
TACGCCAAAG ATTTAACAAG CTTTATGAGC ATATTCATGT TGATAGCGCT TGGCGCTGGA
ATCTTTAAAC CAGTAGTCAC CGCAACCATT AGCCGAACAA CGGATGATAC TAACCGCGGT
TTAGGCTTTG GTATTTTTTA TATGATGGTT AATATTGGCG GCTTTCTAGG CCCAGTATTA
GCGCCGATAA TTCAAAAGCA TTATGGCTGG CAATGGGTGT TCATTTTTGC CTGTATTTGG
ATTTCGGTAA ATTTTATTCC AGCGTTATTT TTCTATAAAG AGCCTGAACG TCATGCAAAA
AACAAAACTC TGAAACAAGT CTTTCAAGAA ATGCAGCAGG TACTTGGTAA TTTCCGTTTA
GCCTTATTAG TCGTTCCTTT ATTGGTGCTG TTAGTGGCTT TTTATGCGGG TTTTATTGGC
GCACAAAGTA CGCTGTTAAT TGTTATCTTT CTGGTGATCA GTGCTGCTGT TTGGGATATT
ACTGTGGCGA AATATAGTGC CCCAAATAGC AATAAAGTCA CTGAACATGA CTTGTTAGCG
CCAGTAAGTT TGCCATGGTA TTTACAAAAA ATGCGTATTG GTAATAAACC TTTTATGATC
TATTTGCTTA TTTTGACAGG GTTTTGGACT GTCTATATGC AAATTTTCGT TACCTTACCT
GTCTACATTC GAGATTTTGT CGATAGTTCA GATTTAGTCT CAATTCTTCA TTCTCTTAGT
CCTTGGTTAC ATGATGTTTT AACGTCAGTT AATATTGACA TACTATCGGG GGAAATCTCA
CGATTAGCTG AGTATTATCG AGAGGTCGAT ATCGGCCAAA GTCCTATGGC TTTACAAGAG
GTAATACGCA CGTTTTCCGC ACTCGATGTA CGTATTCCTG AGCATGAAAT TATCCATAGT
TTTGCTCAAC TAAATCAAAT GCAGTTAGTA ACGGACCCAA GTGCAGAAGC ATTAAGCAAA
AACTTAGCGA TTCAGTGGTC GACGCAATAT CGTCAAATGA ATCCCGCGAC TATTTTAAGC
ATCGATTTTT TAATGATTAT TATTTTTCAA ATTGCTATCA GCCACGTTGT TGATAAGTTT
AAAGCCTTGC CGGCGTTGAT TGTCGGTACC GCCATTTTAT CCGTTTCTAT GTTAATGCAG
GGCTTTGCCC ACGGCTTGAT CTTTGGCGGA TTGTTTGTGT GTTGTGGGGT TATGGTATTT
GCCGTTGGCG AGATGATTTC AGCACCTAAA AGCCAAGAAT ACGTGGCAAG CTTTGCCCCT
AAAGATAAAG CGGCCATGTT CATGGGCTAC TACTTTGTTT CTATGGCATT AGGTAATTTA
TTTGCTGGCT TACTTTCAGG TTGGTTATAT GGCTATTTTG CCAGCCAATT ATCACGTCCT
GAATGGATGT GGGCCATTAT TGCCTGTCTA GGTTTTGTGA CTTGTATCGC TTTTTATTTT
TTTAATAAGC ACTTTATTAG CGATATACAA AAACAGCAGT TAGCACAAAA AGAGCAGTCA
TTATCGGTCG CTTAA
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| Protein sequence | MSQTKRSPFQ RSFYVANTME IFERLAWYGM YTLLASYIMT PSSQGGLGLG NTERGLIMGV
VPFFLYLFPV ISGALADRFG YRKMFLLSFI LMAPSYYFLG YAKDLTSFMS IFMLIALGAG
IFKPVVTATI SRTTDDTNRG LGFGIFYMMV NIGGFLGPVL APIIQKHYGW QWVFIFACIW
ISVNFIPALF FYKEPERHAK NKTLKQVFQE MQQVLGNFRL ALLVVPLLVL LVAFYAGFIG
AQSTLLIVIF LVISAAVWDI TVAKYSAPNS NKVTEHDLLA PVSLPWYLQK MRIGNKPFMI
YLLILTGFWT VYMQIFVTLP VYIRDFVDSS DLVSILHSLS PWLHDVLTSV NIDILSGEIS
RLAEYYREVD IGQSPMALQE VIRTFSALDV RIPEHEIIHS FAQLNQMQLV TDPSAEALSK
NLAIQWSTQY RQMNPATILS IDFLMIIIFQ IAISHVVDKF KALPALIVGT AILSVSMLMQ
GFAHGLIFGG LFVCCGVMVF AVGEMISAPK SQEYVASFAP KDKAAMFMGY YFVSMALGNL
FAGLLSGWLY GYFASQLSRP EWMWAIIACL GFVTCIAFYF FNKHFISDIQ KQQLAQKEQS
LSVA
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