| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1450 |
|---|
| Symbol | |
|---|
| ID | 3521336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 1491713 |
|---|
| End bp | 1492630 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637283913 |
|---|
| Product | hydroxyproline-2-epimerase |
|---|
| Protein accession | YP_268192 |
|---|
| Protein GI | 71280867 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3938] Proline racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.273254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA AGCGACTTGA TTTCATTGAG CGCTATGACT GGATACGTCG AGGGTTAATG
TTTGAACCGC GTGGGCACGA TATGATGTCT GGTGCATTTT TATATCCACC TTGCAGTAAT
AATGCCGATG CATCGATTCT ATTTATTGAA ACTTCTGGCT GCCTACCTAT GTGTGGCCAT
GGCACTATTG GCACGGTTAC CGCAGGATTA GAGAGCGGTA TTATCACGCC AAAAATTCCA
GGTAAGCTCA TTATCGATGT GCCTGCAGGT CAAATTATCA TTGAGTATCA AGAAAATGAT
GGCAAAGTTT CTAACGTTAA AATATTCAAT GTTGCCTCCT ACTTAGCACA CCGAGATATC
ACTTTAGATA TTCCTGAGTT GGGTCAGTTA ACTGTCGATG TCTCTTACGG CGGTAATTTT
TATGTGATTG TTGAACCACA AGAAAACTTC CCCGGAATCG ACCAATGGAG TGCTGCAGCG
ATATTACAGT GGAGTCCTGT TATTCGTGAA GTGGCAAGTA AAACCCTTGA TTGTGTTCAC
CCAGAAGATG CCAGTGTTAA TGGCGTTAGC CACGTTTTGT GGACAGGAAA ATCGCAAACC
AAAGGCTCAG ACGCAGCCAA TGCGGTATTT TATGGCGATA AAGCCATTGA CCGCTCTCCT
TGCGGCACGG GAACTAGCGC GAGAATGGCA CAATTATTTG CCAAAGGTGA GTTAGCTTTA
GGGGATACTT TTATTCATGA GAGTTATATC GGTAGTCAAT TCACCGGCAA GATTGAAGGT
GTTGTGGAGT TAGCTACTCA AGGCAAACCT ATAACCGCCA TAATGCCGAG CATACAAGGT
TGGGCGAAAG TTTTTGCAAA AAACTGCATC ACTATTGATG ACGATGACCC TTATGCTTTT
GGCTTTAGCG TTAAGTAA
|
|---|
| Protein sequence | MSEKRLDFIE RYDWIRRGLM FEPRGHDMMS GAFLYPPCSN NADASILFIE TSGCLPMCGH
GTIGTVTAGL ESGIITPKIP GKLIIDVPAG QIIIEYQEND GKVSNVKIFN VASYLAHRDI
TLDIPELGQL TVDVSYGGNF YVIVEPQENF PGIDQWSAAA ILQWSPVIRE VASKTLDCVH
PEDASVNGVS HVLWTGKSQT KGSDAANAVF YGDKAIDRSP CGTGTSARMA QLFAKGELAL
GDTFIHESYI GSQFTGKIEG VVELATQGKP ITAIMPSIQG WAKVFAKNCI TIDDDDPYAF
GFSVK
|
|---|
| |