Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1375 |
Symbol | |
ID | 3522871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1415210 |
End bp | 1417045 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637283839 |
Product | putative adhesion lipoprotein |
Protein accession | YP_268118 |
Protein GI | 71282397 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATATT TTAAAATACT AAGTGTAACC GTATTAAGTG TGTTTTTATT GCAAGGTTGC AATGACGACG ATAATGACGT AATTGAACAA GTCAAACAAG ATGTAGTTGC ACCAACTACG ATTGTTGATG CTGCTGTTAA TGACGGCAGT TTCACTACTT TAGTTGCTGC TTTACAAGCG ACAGGGCTAG ATACAACCTT GGCAGATACC AGTGCGAAAT TTACCGTTTT TGCGCCAACG GATAAAGCCT TTGCTTTGTT GGGGCAAGGT ACCATTGATG CGCTGCTGGC TGATACTGAT AAGTTATCAG ATATTTTAAC CTATCATGTT ATTAGTGGTG AAGTTGATGC CGCAGCAGCT ATAGCGCTAG CTGGGACAAC CGTTGATATG GTGAATGGTG ATGCCGTAGG TTTATCACTC GATGGTGAAA AATTATTGGT AAATACCGCC ACAGTAATTA CCACTAACAT TCAGACTGAT AATGGTATTA TTCACGTTAT CGATGCTGTT TTACTCCCAC CCGCAGAAAT GATGGAGCCG ACATTGAGTA TTGTCGAAGT AGCACTGGCT GATCCTGATA ATTTCTCTAC CTTAGTTGCC GCGCTTAGTG CTGCTGATTT AGTGACTACC TTGTCAAATG AAGATGCTAC CTTTACTGTT TTTGCTCCGA CTAATGCCGC ATTTGCTTTA ATTGCAGGTG ATACCTTGAC TGCATTGTTA GGTGATACCG ATGCCTTAAC AAAAGTACTA CTGCAACATG TTATAGCAGA TGCTGCTGTA AATTCGGTTA ATGCCTACGC CTTGAGTGGC AATATGGTTG ATACAGCGGG TATGGATAAA ATAGCACTTA ACATCAACAT GGACACAGAT AAGCTATTGT TTGGTGGTGC CAATGTTGTG ATGAAAGATA TTTATACAAC CAACGGCATT ATCCATGTGA TAGATGCGGT AATTATTGGT GATGTGGCAT TACCAAAACC GAGCATGAGC TTAGTTGATA TTGCCAGTAG CAACAGTGAT CTATCGACAC TAGTGTCAGC GTTGCAATCA ACAGGCCTAG ATACCGTCTT AGCTAACCTT GATAATGACT ATACTGTTTT TGCTCCAACT AATGCCGCTT TTGCTAAATT ACCTGCTGGC ACAGTTGAAG GATTAACTAG CGAACAATTA AGTAACATAT TGCTATATCA CGTAATCGCT GGCGAAGTTC TTGCTGATGG CGCTATCAAC TTAGCTCAAT CTATGGATAA CATGGCAGAA ATGGCGAATG CGAGTAAAGC CGCTGTATCG TTCACTGATG GCATGCTTTT CATTAATGGC GCTAAGGTAA GTGCAGCTAA TGTTATGGCT GCAAATGGTG TTGTTCACTT AATTGATAAT GTGATTATGC CTCCTGCAAT GATGGGTACG CCAACATTGA ATATTGTTGA AGTCGCTTTG GCAGACCCGG ATAATTTTTC TACCCTAGTA ACCGCACTTA CTGCTGCTGA TTTAGTGACT ACTTTATCAA ACGAAGATGC TATGTTTACT GTTTTTGCTC CAACTAATGC CGCCTTTGAT AAGATTGACA GTGAAGCTTT AACCGCTTTA TTAGCAGACA CTGAGATGCT TACTAAAGTC TTATTAACTC ATGTTGTGGG TGAAAGTAGC TTAAGTTCTA CAGATGCTTA TGCAAAAAAT GGACGTTCAT TAACCACAGC ATCGGATGTA ATGATTGATG TGAGTATTGA CGCTGATACG GGAATGCTGA TGATTGGAGG AGCTAAAGTA ATTATCTCTG ATATCTACAC AACAAACGGT GTTATTCATG TAATCGATAC CGTGATTATG GAATAG
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Protein sequence | MKYFKILSVT VLSVFLLQGC NDDDNDVIEQ VKQDVVAPTT IVDAAVNDGS FTTLVAALQA TGLDTTLADT SAKFTVFAPT DKAFALLGQG TIDALLADTD KLSDILTYHV ISGEVDAAAA IALAGTTVDM VNGDAVGLSL DGEKLLVNTA TVITTNIQTD NGIIHVIDAV LLPPAEMMEP TLSIVEVALA DPDNFSTLVA ALSAADLVTT LSNEDATFTV FAPTNAAFAL IAGDTLTALL GDTDALTKVL LQHVIADAAV NSVNAYALSG NMVDTAGMDK IALNINMDTD KLLFGGANVV MKDIYTTNGI IHVIDAVIIG DVALPKPSMS LVDIASSNSD LSTLVSALQS TGLDTVLANL DNDYTVFAPT NAAFAKLPAG TVEGLTSEQL SNILLYHVIA GEVLADGAIN LAQSMDNMAE MANASKAAVS FTDGMLFING AKVSAANVMA ANGVVHLIDN VIMPPAMMGT PTLNIVEVAL ADPDNFSTLV TALTAADLVT TLSNEDAMFT VFAPTNAAFD KIDSEALTAL LADTEMLTKV LLTHVVGESS LSSTDAYAKN GRSLTTASDV MIDVSIDADT GMLMIGGAKV IISDIYTTNG VIHVIDTVIM E
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