| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1317 |
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| Symbol | |
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| ID | 3518621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1356861 |
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| End bp | 1357817 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283781 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_268060 |
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| Protein GI | 71278909 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGT TAAGCTTACT AAAGCTATTT GTTAACGCGG TTGATCATGG TGGTTTTGCG
GCGGCTGCAA ATCACTTAGG TTTGTCTGCA TCGACCGTGA GTAAAGGAAT GGCACGCCTT
GAAGATAATC TTAGTATTAA ACTATTCAAC CGCTCTACCC GTCAGGTTCA TTTAACTGAT
TCAGGTTCTC GTTATCTAAT CACGGCAAGG CGAATAGTCT TAGAGCTAGA ACAATGTGAA
CAAGACTTAA AACAAACCAA TGATCTGCCA TGTGGACAGG TTAAAGTAAA CTTGCCAGTG
TCTTATGGTC GGCTTTATGT GATGCCGTTA TTACAGGAGT TTACTCAGTT ATATCCAGAC
ATCACCTTGG ACGTTTCGTT TAATGATAGT TATGTTGATA TTTTAGAACA GGGCATTGAT
TTAACCATTC GTACCGGTAA ACTCGATGAC CAACGGCTGG TTGCACGTAT GCTGAGCCCA
ATTGATTTTA TTCTTTGTGC CTCACCTGCC TATATTGCTG CTAATGATTT TCCTGCCTGC
GCCGCAGAAT ACTCTCAACA TAGTTGGATT CGTTTCAAAT ACCCTCAGTC TGGACGTTTA
ATGCCCATCA CGGTCGATGA AGGTCATGGG GTTGAGAGTT ATGATCCTGG CAGTCAGTAT
ATTGTTAATG ATGGTGAAGC TCTGGCTGAG CTATGCGCCC AAGGGCTTGG TTTAACCCAA
CTACCCCATT TTATTGCCCG CGACTGGCTG AAATCGAAAA GCATTGTCCC TATTTCATCT
TTTCTTCGTT CATCAGAAGG CGTTTATTGT GTTTATCCAA AACGCGAGTT TTTACCCACA
AAAGTCAAAG TACTCATTGA ATATTTACTC ATGAAAATTG AACAAAATGG TGAGAATACT
TATCACACTT GGGCTGAAAC CTTACAACCG GTAGCACATG AAAAAAACGG TGATTAA
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| Protein sequence | MDKLSLLKLF VNAVDHGGFA AAANHLGLSA STVSKGMARL EDNLSIKLFN RSTRQVHLTD
SGSRYLITAR RIVLELEQCE QDLKQTNDLP CGQVKVNLPV SYGRLYVMPL LQEFTQLYPD
ITLDVSFNDS YVDILEQGID LTIRTGKLDD QRLVARMLSP IDFILCASPA YIAANDFPAC
AAEYSQHSWI RFKYPQSGRL MPITVDEGHG VESYDPGSQY IVNDGEALAE LCAQGLGLTQ
LPHFIARDWL KSKSIVPISS FLRSSEGVYC VYPKREFLPT KVKVLIEYLL MKIEQNGENT
YHTWAETLQP VAHEKNGD
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