| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1278 |
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| Symbol | |
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| ID | 3518560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1314810 |
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| End bp | 1316684 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637283742 |
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| Product | putative lipoprotein |
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| Protein accession | YP_268021 |
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| Protein GI | 71278887 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.246143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAAT ACTCAGTTAA AGATCTCGCT CAATTTATTA AAAAATCAAA GGAAAGTGAT
ACACCATTTG TTTTATTTAC AGGAGCCGGT TGTTCGAAGT CAGCGGGTAT ACCATTGGCA
GGAGAGCTTG TAGAAAAAAT TAATGAAGAT TTTGAACTTG AACTTAAGGG ACTTTCTAAA
GACGATAGAC AAAATTACGG TAAATGTATG TCTGTTCTCG TTAAAGAGGA TCGACGTAAA
CTGATTAGCG ATTATATTAG TAAAGCTAAG ATTAATTGGA CTCATATTGC AATAGCTTTA
CTTATAGAAA AGGGATATTT TCAAAGAGTC TTAACCTTTA ATTTTGATAA TTTATTGGCA
AGGAGCAGCG GACTATTAGG CCTTTATCCA GCAACTTATG ATTTAACGAC CGCGGATCTT
GATTTGCATA ACTTAATTGT TGAACCAGCA GTAGTTCATA TTCATGGGCA GAGTCATGGT
TTTACTTTAT TAAATAGTGA TGAAGAGACT TCTAAACATG CGGAGAGCTT GGAAAATTTT
ATTGCTTCTA CACTAAATCA GTCACCAACA TTATTTGTTG GTTATAGCGG TTATGCTGAT
GCATTCTTCC CTATTTTAGA GAAAAAATAT ACAGGGCAAC ACAGGTTGTT CTGGTCGGGG
CGCTCAAAGA AAGAACCCGA GCATTTAAGT ACTTCCTTAT TAAAAAACTA TGGAAGTTTT
GCCCATTATA TTCAGGGCGA AGATTCCGAT ATATTTTTTA TAGAGTTAGC TCAAGAACTC
GGCTGTTTTC CCCCTAAAAT ATTTGAAAAT CCATATGATC ATTTATTAGA TGAACTAAAG
CATGTAACAG ACTTTCCACT ACATGAGTCT ATACATCGAG ATTTATTTGC GAAAATTAAA
AAACAATTAA AGAATGATAG TGAGCAATAT TTAAAAGAAA GCCTTTTAGA TACAGATAAA
TTATTAATAG AAGGAAGATA TCAAGAGTTG ATAGATTTAT ATGACAACAA CTCAAAATTA
TTAGAAACTG ACCTAGATAA CATAGCATTA GCTTATCTTC GTCAATGTAA TGATTTAATT
CGCAATACTA ATGATTTTGA ACTTGAGGAG ATTAAAGCAA CAGTCATTGA AAATTATTCA
AAAGCGCTTG AAGTTAAAAA AGATTTTTAT TTAGCACCAT TTAATCTTGG GGTTTTTTAT
AAAGATTTAG CAAGTTTTAC TTCTGAGAAA GGTGTTAAAA AAATATATGT TGAAAGGGAA
ATAGAGCAGT ATCGAAAGTC TATCTTGATT AATGCTAATG ATTATTTTAC TTATAACAAC
TTGTGCTCTG CATTATTAGT TTTATCCGAT TTTACAGAAG ACTTTGAAAT TAAAGAAACT
TTAATATTTG AAGCTTTAGG AGCTTCAGAG CAAGCTATAA AAATTGATGA TAAAGAATGG
AATGCATATT GTTTATTTGG TCAAGCATAT TTTACATTAG GTGAAATCAA AACAGTAAGT
AATGATAAAG AAAAATACTT TAAATTAGCT TTGAATTATT TTGATTCATC TAATATGGCA
AAGCCTAATA ATGAATTTAT ATTAGACACC TCAGGGCTAA TTTGCTTAAA ATTATATACC
TTAACAGCTA AAAAATATTT TTTAGATAAA AGTTTTGAAT ATTTAAATGA ACTTGACAGA
CTCAATCCCA AAAAGGTGTA TAACTTAGCG TGTGCATATG CTTTAAATCT GCAGCTTGAT
AAGTGTAGAG CAATGCTTGA GCGAGCTTTA GCTTCAGATA CATTACCTTC TAAAATGCAT
TTGTTGAAAG ATAAAGACTT AGACGTTGTT TGTGAATTAG AGTGGTTTAA AGAATTGATA
TCTAAAGCTA ACTAA
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| Protein sequence | MSKYSVKDLA QFIKKSKESD TPFVLFTGAG CSKSAGIPLA GELVEKINED FELELKGLSK
DDRQNYGKCM SVLVKEDRRK LISDYISKAK INWTHIAIAL LIEKGYFQRV LTFNFDNLLA
RSSGLLGLYP ATYDLTTADL DLHNLIVEPA VVHIHGQSHG FTLLNSDEET SKHAESLENF
IASTLNQSPT LFVGYSGYAD AFFPILEKKY TGQHRLFWSG RSKKEPEHLS TSLLKNYGSF
AHYIQGEDSD IFFIELAQEL GCFPPKIFEN PYDHLLDELK HVTDFPLHES IHRDLFAKIK
KQLKNDSEQY LKESLLDTDK LLIEGRYQEL IDLYDNNSKL LETDLDNIAL AYLRQCNDLI
RNTNDFELEE IKATVIENYS KALEVKKDFY LAPFNLGVFY KDLASFTSEK GVKKIYVERE
IEQYRKSILI NANDYFTYNN LCSALLVLSD FTEDFEIKET LIFEALGASE QAIKIDDKEW
NAYCLFGQAY FTLGEIKTVS NDKEKYFKLA LNYFDSSNMA KPNNEFILDT SGLICLKLYT
LTAKKYFLDK SFEYLNELDR LNPKKVYNLA CAYALNLQLD KCRAMLERAL ASDTLPSKMH
LLKDKDLDVV CELEWFKELI SKAN
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