Gene CPS_1245 details

Gene Information

• Locus tag: CPS_1245
• ID: 3518947
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 1276708
• End bp: 1277385
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637283709
• Product: hypothetical protein
• Protein accession: YP_267988
• Protein GI: 71278457

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAGAA CATTACCTGT AATCAATATT AAAGCGCAGA GCAGTCACCA TGCGCTTTTT 
CTAATGCTCG TTGCTCTGAT TATCACTTTC TCCACCCTAG TATTTAGCCA AGGCTATTGG 
CGACAATTTC AGTTGGTGTT CACCTTTATC TACCTGTGTT CATTAGTGAC CTTTATAACC 
GGTTTAGCAA AGTACCTAGA GCCTAAATAC AGTTTATGCC TTAATCCCAA GAGCATAAAA 
TATCAGCATA GATATGGTCA CTGGAAAATT GACTGGCAAC AAATTCAACG GATTTCATTA 
ATAAACGAAA CCTCAGGGCT AACGAAAATA CAATTACCCT ATATTGGTAT TCGTTTAAAA 
AACGTATCTA CGCTGGCCGA TAAAATATCA CCACGCTTAG CTAACCGCCT CATTCATGAA 
CAAAAACCGC TAGTCGCTTT TGCAATGAGT CAGGATTTGC TTCCCCTTGG GCAAAGCCTT 
CTTAATTTCG AGCCTTTTAT TTTACCTTCG GGTGAAACGT TGACTGGGCC ACTAGCTGCA 
TTCCTACATC ACTGTTCCTT ATTGAATCAA TCCTTGGGCT ATCACTTGTT TTTGCCTGAA 
ACAGCCATAG ACCGCGACCT TAATGAGTTC TGTACTTTGC TGACGCAATG TATGAGATCT 
TCTACTGAAT ACAACTGA 

 

Protein sequence

MTRTLPVINI KAQSSHHALF LMLVALIITF STLVFSQGYW RQFQLVFTFI YLCSLVTFIT 
GLAKYLEPKY SLCLNPKSIK YQHRYGHWKI DWQQIQRISL INETSGLTKI QLPYIGIRLK 
NVSTLADKIS PRLANRLIHE QKPLVAFAMS QDLLPLGQSL LNFEPFILPS GETLTGPLAA 
FLHHCSLLNQ SLGYHLFLPE TAIDRDLNEF CTLLTQCMRS STEYN