| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1229 |
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| Symbol | |
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| ID | 3518649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1261760 |
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| End bp | 1262482 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283693 |
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| Product | LrgB-like family protein |
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| Protein accession | YP_267972 |
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| Protein GI | 71277771 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACTA CTTTCATTGT TAACAGCCCT ATATTGGCAA GCATAGTTTT TACCTTAATC
ACTATAGCAA CTTATCAGTT TGCCTCCGCT TGCCAACAAA AATGGCAATA CATTTGGTTA
AACCCTATGC TGTTTACTAT TAGCATATTG GTTCCTTTCT TACTGTTAAT TGATATTAAT
TACCAAGAAT ATAGTCAGAC AACAGAGATA CTTAACCTTT TACTAGAGCC AGCTATTGTT
GCCCTCGGCA TGCCTCTTTA TCAGCAATTT AAGCAGATAC GCTTCTATTG GCGAGAAATG
ACCGCTATTT TAGTCTTAGG TATTACAGTC GTTATTACCG TAAGCTTTTT ACTTGCTATG
TGGTTAATAA AAGCACCTGA GATTGCCATC GCTTTGTCAT TAAAATCTGT CACAACCCCC
ATAGGTATTA CTTTAACAGA ACAGTTGTTT GGTGATAGCT CTATCACGGC TTTTGCTATC
TTGATTGCTG GTTTATTTGG TGCATTACTG GGACCTCAAT GGCTGAGTTT TATTGGCATA
AACTCAGCTA AAGCACAGGG GTTAGCCATT GGTAGCGCCA GTCATGTTAT TGGCACTGCA
GTACTCGTTC GCAAGAGCGC AGAGCATGGC GCATACAGCT CTGTTGCATT GATTCTATCT
GCCATACTCA CCGCACTGAT CAGCCCTTGG TTAATACCTC TATTACAGCG GTTAGTTACC
TAG
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| Protein sequence | MLTTFIVNSP ILASIVFTLI TIATYQFASA CQQKWQYIWL NPMLFTISIL VPFLLLIDIN
YQEYSQTTEI LNLLLEPAIV ALGMPLYQQF KQIRFYWREM TAILVLGITV VITVSFLLAM
WLIKAPEIAI ALSLKSVTTP IGITLTEQLF GDSSITAFAI LIAGLFGALL GPQWLSFIGI
NSAKAQGLAI GSASHVIGTA VLVRKSAEHG AYSSVALILS AILTALISPW LIPLLQRLVT
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